Segatella oris: NCTC13071_01602
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Entry
NCTC13071_01602 CDS
T06067
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
poc
Segatella oris
Pathway
poc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
poc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC13071_01602 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poc03400
]
NCTC13071_01602 (uvrB)
DNA repair and recombination proteins [BR:
poc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13071_01602 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC13071_01602 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF2785
AAA_16
Motif
Other DBs
NCBI-ProteinID:
VEH15598
UniProt:
A0A3S4VA12
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All DBs
Position
1:1852169..1854217
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AA seq
682 aa
AA seq
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MDFKLTSKYSPTGDQPEAIEQLTEGIKEGIPAQVLLGVTGSGKTFTVANVIANANKPTLI
LSHNKTLAAQLYEEMKGFFPDNAVEYYVSYYDYYQPEAYLPTSDTYIEKDLAINDEIDKL
RLGAVSALLSGRKDVIVVSSVSCIYGMGGPVAMQESIIKIKRGQTLDRNEFLRKLVDALY
VRNDIDLQRGTFRVKGDTVDISMAYSDNILRVTWWDDEIDCIEEVDSATFHSLERFETYE
IYPANLFVTSKEQTERAIRMIQDDLTERVEYFNSIGDNIKAQRVKERVEYDMEMIKELGH
CSGIENYSRYFDGRQPGERPYCLLDFFPKDYLMVIDESHVSVPQINAMYGGDRARKQNLV
EYGFRLPAAFDNRPLRFEEFHSLINQIIYVSATPAKYEIEEAEGVIVEQIIRPTGLLDPE
IEVRPSENQIDDLMDEILTRIHRQERVLVTTLTKRMAEELTEYLLNHEIKANYIHSDVAT
LDRVKIMNDLRAGVFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGRA
ARNVNGKVIMYADTITESMQKTIDETARRRSIQLKYNEDHHITPKQIKKQIGSSLASLSV
ESNDRKNAATQNGKYPGIYLEPESGAFAADPIVKRMSKAELEKSIANTTALMKQAAKDLD
FIQAAQYRDEIIRLQEQLKDKV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaacttacttcaaaatacagtcctaccggtgaccaacccgaagccattgag
caattgacagaaggcatcaaagaaggtatccctgcacaggttttgttgggtgttaccggc
tcaggaaagacatttactgtggccaatgtcattgcaaacgccaacaagccaaccttgatt
ttaagtcataacaagacacttgcagcccagctctatgaggaaatgaagggctttttccct
gataatgccgtggaatattatgtttcatactacgactattaccaacccgaagcctatctt
ccgacctcagacacctatatagagaaagaccttgctatcaatgacgagatagataaactg
cgattaggtgccgtttctgccctgctttccggccgcaaagacgtgattgtagtatcgtcg
gtttcatgtatttatggtatgggagggcctgttgccatgcaggaaagtatcatcaaaatc
aagcgtggacagacactcgaccgcaatgagtttttgcgcaaactcgttgatgcgctctac
gtaagaaacgatattgatttgcaaaggggaacctttcgggtgaaaggcgacacggtagat
atctccatggcttatagcgacaatatcctccgtgtgacgtggtgggacgatgaaattgac
tgtattgaggaagtggacagcgcgacttttcacagcttagagcgttttgagacctatgaa
atctatcctgcaaatctcttcgttacctcgaaagaacagaccgaacgggctatccgcatg
atacaagacgacttgacagagcgcgtggaatactttaactcaattggtgataacattaag
gctcagcgagttaaagaacgtgtggaatatgacatggagatgataaaagagttgggacat
tgcagtggtattgagaactactcgcgctatttcgatggccgccagccaggagaacgcccc
tattgcctgcttgatttcttcccaaaagactatctgatggtgattgacgaaagccatgtg
agcgtgccacaaatcaatgcaatgtacggcggagaccgtgcccgaaagcagaatctcgtg
gaatatggtttccgattgccggcagctttcgacaaccgtccattgagatttgaggaattc
cattcactgattaaccagattatctacgtcagtgcaacaccggccaaatatgaaatagaa
gaggctgagggtgttattgtggaacagattatccgtcctaccgggctgttagaccccgaa
atagaggttcgtccatcagaaaatcagatagatgatctcatggatgagattctaacacgc
attcaccgacaggaaagagtgctcgtaacaacgcttacaaagcgaatggcagaagaacta
acagaatatcttttgaaccatgaaataaaggcaaactatattcatagtgacgtggcaaca
ctcgaccgcgtgaagattatgaacgacctgcgagccggtgtttttgatgttcttgttggc
gtaaacctacttcgcgagggtcttgatttgccggaagtgtcgttggttgccattctcgac
gcagacaaagaaggtttcttgcgcagtcatcgtagcctgacacagacagcaggtcgcgca
gcaagaaatgtcaatggaaaggtgattatgtatgccgatactatcacggaaagcatgcag
aaaactatagacgaaactgcacgtcgacgcagtatacagctgaaatacaatgaagatcac
catatcacacctaaacaaatcaagaaacagataggctcctcattagcaagtttgtctgtc
gaaagtaatgacagaaaaaatgcagcgacacagaatggcaaatatcctggcatttatttg
gagccggagagtggtgcctttgctgctgatccgattgtaaaacgcatgtcaaaggcagaa
ttagagaagagcattgccaacacaacagctcttatgaagcaagcagcaaaagaccttgac
tttattcaagccgctcaatatcgcgatgaaatcatccgcttgcaggaacagttgaaagac
aaagtataa
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