Paenibacillus odorifer: PODO_28350
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Entry
PODO_28350 CDS
T03326
Name
(GenBank) type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pod02044
]
PODO_28350
02035 Bacterial motility proteins [BR:
pod02035
]
PODO_28350
Secretion system [BR:
pod02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
PODO_28350
Bacterial motility proteins [BR:
pod02035
]
Pilus system
Pilus assembly proteins
PODO_28350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Tenui_N
MotA_ExbB
DUF996
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
AIQ76808
UniProt:
A0A1R0WPG5
LinkDB
All DBs
Position
complement(6292684..6293889)
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AA seq
401 aa
AA seq
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MPLFEYQVKTSAGKSIKGKLTATDKPTAMEELRKRGLTVFSLIERKTTILSMDIYIGNPV
KPLHFIIYCRQFATLMRAGVSIVDATRILAEQTESKPLRKALVDVNSSLMRGISFSQAVQ
DHKKIFPQLFVSMIRAGEESGDIEGTLDRLAMFFEKQHTTTEKIKSALTYPITVGVMAIA
AVIYLLWAIVPQFVTMFESMDAELPAITQMVLALSKSIQGQWYFWILGVLLLVIAFQITK
RTEKGAYALDYAKLKIPVFGKLNQKGSIAQFTRTFSSLYASSVPILQSLVIVEEVAGNKV
IGKFIRSAGDSLRQGNPLSEPLKKAWVFPPLVTQMIAIGEETGALDTMLSKVADFYEMDV
ENTVDRLKSLLEPLLIAFLAAVVGVIVAAIMLPMFSLYGNM
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttttgaatatcaggtgaagacatccgcaggcaaatctatcaaagggaaacta
acggcaaccgataaacctacggcgatggaggagctacgcaagcggggacttacggtattt
tcactgattgagcgcaaaaccacgattttatcgatggacatttatattggtaatcccgtt
aagccgcttcatttcatcatttattgcaggcagtttgccacgcttatgcgggcgggggta
tcgattgtggatgcaacgcgtattttggcagagcagaccgagagtaagccactgcgcaaa
gcgttagtagatgttaattctagcctgatgcgcgggatatcgttctcacaagccgttcag
gatcataaaaaaatcttcccgcagctatttgtcagcatgatccgtgccggtgaggaatcc
ggtgatattgaggggacgttggacaggttggctatgttttttgagaaacagcacaccacg
acagagaagataaaatcagcgcttacgtacccgattaccgtaggggttatggcgattgcc
gcggttatctatctactttgggcgattgtgccgcagtttgtaacgatgtttgaatcgatg
gatgccgagcttccggcaattacacagatggtcttggcacttagcaaaagcattcaaggt
caatggtatttctggatactcggagtacttctcctagtgatagcttttcagattacaaaa
cgtacggaaaagggtgcttacgcccttgattatgccaagttaaaaattcctgtgttcggc
aagctgaatcaaaagggctcgattgctcagtttacgcgtactttttcttctctttatgcc
agctctgtaccgatcctacagtccttggtgattgttgaggaggtagcaggaaataaggtc
atcgggaaattcatccgtagtgcaggggattcgctgcgacaaggaaatccactatctgag
ccgctaaaaaaagcctgggtcttcccgccactagttacgcagatgatagcgattggcgaa
gagacaggggcgctcgacacgatgttgtccaaggtagctgacttttatgagatggacgtg
gagaataccgtcgaccgtttgaagtcgctgcttgaaccattattgattgcttttctagcc
gctgttgtaggtgttattgtggccgccattatgctgccaatgttcagtctgtacggaaat
atgtga
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