Polynucleobacter paneuropaeus: DPM16_05915
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Entry
DPM16_05915 CDS
T05507
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
poh
Polynucleobacter paneuropaeus
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poh03009
]
DPM16_05915
Enzymes [BR:
poh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
DPM16_05915
Ribosome biogenesis [BR:
poh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DPM16_05915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
AWW44798
UniProt:
A0A2Z4JRS5
LinkDB
All DBs
Position
complement(1169606..1170637)
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AA seq
343 aa
AA seq
DB search
MKSTPSPKPQTKPMSRPAKTKIPVAPAVRLETIGPEEAGQRLDNYLLRWAKGVPKSHVYR
IIRSGEVRVNKKRAEPTTRLIEGDVVRVPPVRIAEPAQIAAANSAQTQSRAQGFSDKMPI
LFEDEALLIVDKPPGLAVHGGSGIALGVIETLRITRPELNFLELVHRLDRDTSGVLMLAK
KRSALVEMHRQIREGHTDKRYYLLAHGAIDAGPGTMQLKFPLHKYLLPNGERRVRVDPEG
LPSHTALRLVKKLQQGDVAISFAEAQLKTGRTHQIRVHLQKLGHAILGDDKYGFEDADKR
IKSKRLYLHAHLAGFTHPRTGEKMRIESPLPAEFAAMMQSFEQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgaccccatcccccaagccccaaactaagccaatgagtaggcccgccaagacc
aaaatcccggttgccccagcggttcgcttggaaacgatcggacccgaagaggctggacag
cgtctagataactacctcttgcgctgggctaagggcgtccccaaaagtcatgtatatcgg
attattcgctcaggtgaagtgcgggtcaataaaaaaagagcagagcccacaacccgtctc
attgaaggtgatgtcgttcgagtaccccccgtcagaattgcggaaccagcccaaattgcg
gctgcgaattctgctcaaactcaatcccgtgcccagggcttttctgacaagatgccaatc
ttatttgaagatgaggctttactgattgtcgataagccaccaggactagctgtgcatggt
ggctccggaattgcgcttggcgtgattgagacacttcgtattactaggcccgaactgaat
tttctagaattggtacatcgcttagatcgagatacttctggcgttttaatgttggctaag
aagcgtagtgctttagtagagatgcaccggcaaattcgggaaggccacaccgataaacgc
tattacctcttggcgcatggtgcaattgatgctggcccaggcaccatgcaactgaaattt
ccactccataagtatttattgcctaatggtgagcgtcgggtgagagttgatcctgaagga
ctacctagccataccgccttgcggcttgtcaaaaagttgcaacaaggggatgttgcaatc
agttttgctgaggcgcaattaaagacgggccgtacccaccaaatccgggtgcatttacaa
aaactggggcatgccattttgggtgatgataagtatggctttgaggacgcagataaacgg
attaaatccaagcgactctatttgcacgctcatctagcaggctttacccatccgcgaacg
ggagaaaaaatgcgtattgagtctcccttgcctgcagaattcgcagccatgatgcaaagc
tttgagcagtag
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