Polynucleobacter paneuropaeus: DPM16_08170
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Entry
DPM16_08170 CDS
T05507
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
poh
Polynucleobacter paneuropaeus
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poh03016
]
DPM16_08170
Transfer RNA biogenesis [BR:
poh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
DPM16_08170
Prokaryotic type
Methyltransferases
DPM16_08170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Arf
Dynamin_N
AIG1
Ras
RsgA_GTPase
Roc
MCM
AAA_28
LON_substr_bdg
Motif
Other DBs
NCBI-ProteinID:
AWW45334
UniProt:
A0A9Q7CX70
LinkDB
All DBs
Position
complement(1609912..1611282)
Genome browser
AA seq
456 aa
AA seq
DB search
MTRKVPIIAVASAPGKAGVGVIRISGSELKSFASSLLQKPLAPRQASLQSLRDGHNNIID
QLLAIYFEAPASFTGEDVLELQCHGGPQLLELVMKRCLEVGKEIDLCIAEPGEFTLRAYL
NNKMDLAQAEAVADLIDAQSEAAVRSAARSLQGAFSDDINALVEEITQLRILVESTLDFP
EEEIEFLENAQAKERLQKVISRLAHLRANAKQGKILRDGIQLVLVGAPNVGKSSLLNRLA
GEEVAIVTPIAGTTRDRVKESITINGVPIHIIDTAGLRDTQDEVEAKGIERSWDAIRTAD
LVVYLKDAANAGKESAKDTKLKAEIIAALPPKCPILEVHNKADLLPANAFAASETLKISA
KTGDGVEGLKNRILEIAGWSAPQEGGILARRRHLDCLDRAMEHIEKSEQFAANGNNSLEL
FAEELHLAQDELGKITGKLLPDDLLGKIFSQFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtaaagtgcccatcatcgctgttgctagtgcaccaggcaaagccggcgttggg
gttatcaggataagcggctctgagctcaaaagcttcgctagtagcctattacaaaaacca
ctcgcacctagacaagcaagccttcagagtttgcgtgatggacataacaacatcattgac
cagttgctagcaatttactttgaggcgcccgcctcatttactggcgaagatgttctcgaa
cttcaatgtcatggtgggccacaacttttagagttggtcatgaagcgctgcctagaagtt
gggaaagagattgacctatgcattgccgagcccggcgagttcactctgcgtgcctactta
aacaacaaaatggatttggctcaggccgaagctgtggccgatcttattgacgcacaaagt
gaggccgcggttcgaagtgccgcacgctctttacagggcgcattctcagacgacatcaat
gcattggtggaagagattacgcaattgcgaattttggtcgaatctactctcgattttccc
gaagaagaaattgagtttttagaaaatgcccaagccaaagagcgcctacaaaaagtgatc
tcgaggcttgcgcacttgcgagctaatgcaaagcaaggaaaaatcttacgtgatggcatt
caactggtcttagttggtgcgccgaacgttggtaagagttcattactcaatcgattggct
ggcgaagaagttgccatagtgacgccaattgctggcaccacccgcgatcgggtaaaagaa
agcatcacgatcaatggcgtgccgattcatattattgataccgctggcctgcgagatacc
caagatgaagttgaagcaaagggtatagaacgctcttgggatgctatccgcacggctgat
ttagtcgtttacctaaaggatgccgccaatgcgggaaaggaatctgcaaaggataccaag
ctcaaggcagaaattattgccgccttgccacccaagtgcccaattttagaagtgcataac
aaggccgatttattgcctgcaaatgcttttgctgccagcgaaactctgaagatttctgcc
aaaactggggacggagttgagggtctaaaaaatagaatccttgaaattgcaggatggagc
gcaccccaagagggtggaatattggcgcgtcgccgccatctagattgcttagatcgtgcc
atggaacatattgagaaatcagagcagttcgccgcaaatggcaacaattcgctagagttg
tttgcagaagagctccatttagcgcaagatgagctaggaaagatcactggaaagctttta
ccagacgatcttttgggaaaaattttcagccagttttgtattggtaaatag
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