Pseudarthrobacter oxydans: SMD14_08020
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Entry
SMD14_08020 CDS
T09608
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok00300
Lysine biosynthesis
pok00550
Peptidoglycan biosynthesis
pok01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SMD14_08020
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMD14_08020
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pok01011
]
SMD14_08020
Enzymes [BR:
pok01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
SMD14_08020
Peptidoglycan biosynthesis and degradation proteins [BR:
pok01011
]
Precursor biosynthesis
Amino acid ligase
SMD14_08020
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WPU11343
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Position
1766899..1768509
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AA seq
536 aa
AA seq
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MQGPARLGPDQPRFRPSAVDAVRLDSIGEAVGVVVPGASADVAVTGISLNSRTVEPGDLY
VALPGATRHGADFAAQAIAAGAAAIVTDDAGARLLALSSDTSVPVLVVDAPRNVVGPLSA
MIYRRSQEGAALQLFGVTGTNGKTTTTYFITSLLRSLGKKPGLIGTIEILAGGEPIPSLL
TTPESPEVHGLLALMREKGLAAAAMEVSSHAISYQRVDGVQFDVAGFTNLTQDHLDLHHT
MEDYFATKAELFTPARARKAVVTVDDEWGRRLAASTQVPVTTLATVPGNSADWTVTEAKP
RGLGTEFTLSGPGGTVLTVHTGLPGSFNVANAALAAVMVLTGGVDAATLQAALDAGDPFT
VAVPGRMQLVSERPAAVVDFAHNTDALARALEAVRSAEPESRLIVVFGATGQRDQGKRPA
MGAIAARLADTVIVTDDDPHDEDAAAIRADVLAGALEARAGESLPCEVLEVFPRDKAIQR
AVELARPQDSILVAGRGHEVWQEVKGVNLALDDRVELRSALTARGFNVLQDDRIES
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
ctgcaaggacccgcacggctgggaccggaccagccccgcttccggccgtccgccgttgat
gccgtccggctggacagcatcggcgaggcggtcggcgtcgtagttccgggagcctccgct
gacgtggcggtgaccggcatctccctgaactcccggacggttgaaccgggtgacctgtac
gtcgcccttccgggcgcaacccggcacggcgccgacttcgctgcccaggccattgcggcg
ggagcggcggccattgtgacggacgacgccggtgcccgcctcctggccttgtcctccgac
acgtcggttccggtgctggtggtcgatgccccgcggaacgtggtgggcccgctgtccgcc
atgatctaccggcgcagccaggagggggcggcgctgcagcttttcggcgtgacgggcacg
aacggcaagaccaccaccacctacttcatcacctcgctgctgcggtccctgggcaaaaag
ccgggcctgatcgggaccatcgagatcctggccggcggcgaaccgattccgagcctcctg
accacgccggagtccccggaagtccacgggctgctggcactgatgcgggagaaaggactt
gctgcggccgcgatggaagtttcctcgcacgccatctcctaccagcgcgtggacggagtg
cagttcgacgttgcagggttcaccaacctcacccaggaccaccttgacctgcaccacacc
atggaggactacttcgccacgaaggccgaactgttcacgcccgcccgcgcgcggaaggcc
gtggtgacggtcgacgacgaatgggggcgccgcctcgcagccagcacccaggtgcccgtc
accacgctcgccaccgtgcccgggaacagtgccgactggaccgtcacggaggcaaagccc
cgcgggcttggcacggagttcacgctcagcgggcccggcggcactgtcctgacggtccac
acggggcttcccgggagcttcaacgttgccaacgcagccctggccgcggtcatggtcctc
acaggcggcgttgacgccgctacgctgcaggcggccctggatgcgggcgaccccttcacg
gtggccgtcccggggcgcatgcagctggtctccgagcggccggccgccgtggtggacttc
gcacacaacacggacgcgctggccagggcgctggaagccgtccggtcggccgaaccggaa
tcccggctgatcgtggtgtttggcgccacaggccagcgcgaccagggcaaacggccggcc
atgggcgcgatcgcggcccgccttgcggacaccgtgatcgtcacggacgacgacccccac
gacgaggacgccgcagccatccgcgccgacgtcctcgcaggggcgctggaagcccgggcc
ggtgagtccctgccctgcgaggtgctggaggttttcccccgcgacaaggccattcaacga
gccgtggaactcgcccggccacaggacagcatcctggttgccggccgcggccatgaagta
tggcaggaggtgaaaggcgtcaacctcgcactggatgacagggtggagctgcgcagcgcc
ttgacagccaggggattcaacgttctccaagacgaccggatagagtcctag
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