Pongo abelii (Sumatran orangutan): 100172879
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Entry
100172879 CDS
T01416
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100172879 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
100172879
NCBI-ProteinID:
XP_009242715
Ensembl:
ENSPPYG00000019211
LinkDB
All DBs
Position
9:25842339..25973664
Genome browser
AA seq
2179 aa
AA seq
DB search
MNSLSWGAANALLLLLLLAWASPTFISINRGVRVMKGHSAFLSGDDLKFAIPKEKDACKV
EVVMNEPITQRVGKLTPQVFDCHFLPNEVKYVHNGCPILDEDTVKLRLYRFTETDTFIET
FILWVYLLEPDCNIIRMSNNVLEVPEFNGLSQAIDKNLLRFDYDRMASLECTVSLDTART
RLPAHGQMVLGKPRPEEPRGDQPHSFFPESQLGAKLKCPGGSCTPGLKKIESLKVSCEEF
LLMGLRYQHLDPPSPNIDYISIQLDLTDTRSKIVYKSESAWLPVYIRAGIPNQIPKAAFM
AMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLLDHTRPISSFTW
KDLSDMQIAYQPPNSSHSERRHDEVELEVYDFFFERSAPMTVHISIRTADTNAPRVSWNT
GLNLLEGQSRAITWEQFQVVDNDDIGAVRLVTVGGLQHGWLTLRGGKGFLFTVADLQAGV
VRYHHDDSDSTKDFVVFRIFDGHHSIRHKFPINVLPKDDSPPFLITNVVIELEEGQTILI
QGSMLRASDVDASDDYIFFNITKPPQAGQIMKKPGPGVIGYPVPGFLQRDLFNGIIYYRH
FGGEIFEDSFQFVLWDSHEPPNLSVPQMATIHITPVDDQLPKEAPGVSRHLVVKETEVAY
ITKKQLHFIDSESYDRELVYTITTPPFFSFSHRHLDAGKLFMVDSIPKVVKNPTALELRS
FTQQAVNYMKVAYMPPMQDIGPHCRDVQFTFSVSNQHGSTLHGICFNITILPVDNQVPEV
FTNPLKVTEGGQSVISTEHILISDADTKLDNIDLSLRGLPLHGRVELNGFPLNSGGTFSW
GDLHTLKVRYQHDGSEVLQDDILLEVTDGTNSAEFVLHVEVFPVNDEPPVLKADLMPVMN
CSEGGEVVITSEYIFATDVDSDNLKLMFVIAREPQHGVVRRAGVTVDQFSQRDVISEAVT
YKHTGGEIGMMPCFDTITLVVSDGEAGPFVNVCCYNGPNPSVPLHASFPVYDLNITVYPV
DNQPPSIAIGPTFVVNEGCSRALTVNHLSATDPDTAADDLEFVLVSPPQFGYLENILPSV
GFEKSNIGISIDSFQWKDMNAFHINYVQSRHLRIEPTADQFTVYVTDGKQHSLEIPFSVI
INPTNDEAPDFVVQNITVCEGQMKELDSSIISAVDLDIPQDALLFSITQKPRHGLLIDRG
FSKDFSENKQPASPHQKHAPVHSFSMELLKTGMRLTYMHDDSESLADDFIIQLSDGKHKI
LKTISVEVTPVNDEKPVLSKKAEIAMNMGETRIISSAILSAIDEDSPREKIYYVFERLPQ
NGQLQLKIGRDWVPLSPGMKCTQEEVDLNLLRYSHTGAMDSQNQDSFTFYLWDGDNRSPA
LDCQITIKDMEKGDIVILTKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPRYG
QIEYVHYPGVPITSFSQMDIVGQTVCYVHKSKVTVSSDRFRFIISNGLRTEHGVFEITLE
TADRALPVVTRNKGLRLAQGAVGLLSPDLLQLTDPDTPAENLTFLLVQLPQHGQLYLWGT
GLLQHNFTQQDVDSRNVAYRHSGGDSQTDCFTFMATDSTNQGFIVNGRVWEKPVLFTIQV
DQLDKTAPRITLLHSPSQVGLLKNGCYGLYITSRVLKASDPDTEDDQIIFKILQGPKHGH
LENTTTGEFIHEKFSQKDLNSKTILYIINPSLEVNSDTMEFQIMDPTGNSATPQILELKW
SHIEWSQTEYEVCENVGVLPLEIIRRGYSMDSAFVGIKVNQVSATVGKDFTVTPSKLIQF
DPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHPSYS
SNQSKHSTWEKGIWRLLPPGSSSSTTSGSFHLERRPLPSSMQLAVTRGDTLQGFDSTDLS
QRKLRTRGNGKTVRPSSVYRNGTDIIYNYHGIVSLKLEDDSFPTHKRKAKVSIISQPQKT
IKVAELPQADKVESTTDSHFPRQDQLPSFPKNCTLELKGLFHFEEGIQKLYQCNGIAWKA
WSPQTKDVEDKSCPAGWHQHSGYCHILITEQKGTWNAAAQACREQYLGNLVTVFSRQHMR
WLWDIGGRKSFWIGLNDQARAGHWEWIGGEPVAFTNGRRGPSQRSKLGKSCVLVQRQGKW
QTKDCRRAKPHNYVCSRKL
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgaactctctgagttggggggctgcaaatgccctgctgctgctgctcctcctggcctgg
gccagccccaccttcatcagcatcaaccgtggggtgagggtgatgaaaggccactccgcc
ttcctgtcaggagatgacctgaaatttgccatccctaaagagaaagatgcctgcaaagtg
gaagtcgtgatgaatgagccaataacccagagggttgggaaactcactccacaggtcttt
gactgccatttccttcccaatgaagtcaagtatgttcacaatggttgtccaattcttgat
gaagacacagtgaagctcagactttacagatttactgaaacagataccttcatagaaacc
tttatcctgtgggtctatcttctggaaccagactgtaacatcatccgtatgagtaacaat
gtgctggaggtgcctgaattcaatggcctgtcacaagcgattgataaaaatctgctcaga
tttgattatgataggatggctagcctggaatgtacggttagcctggacactgcgagaact
cggctgccagcccatggccagatggttctggggaagcctcgaccagaagaacctcgtgga
gatcagccacacagttttttcccagagtcccaactgggagcaaaactgaagtgtccaggt
ggaagctgtaccccaggattaaagaaaatagaaagccttaaagtgagctgtgaggagttc
ctgctgatgggccttcgttatcagcatctggatcccccttcacccaacattgattatatc
tccatccaactggacctcacagataccaggagtaaaattgtgtacaagtcagagagtgcg
tggctgcctgtctatatcagagctggaattccgaatcagattccaaaggctgcattcatg
gccatgtttattttggaagtggatcagttcatcctgacctccttgactacatcagttctg
gactgtgaagaagatgagacccctaaacccttgctggtgttcaacattactaaagccccg
ctccagggctatgtgactcacctgttggatcacaccagaccaatctcctcattcacctgg
aaagatctcagtgacatgcagatcgcctatcagccaccaaacagcagccattctgagagg
agacatgatgaggtagaattggaggtatacgacttcttctttgaaaggagtgcacctatg
acagtccacatctccatcagaacagcagatacaaatgccccccgtgtatcctggaataca
ggtctgaatctccttgaggggcagtctcgagccatcacttgggaacagtttcaggttgtc
gacaatgacgacattggtgctgtccggctagttactgttggtggcctgcagcatggatgg
ctgactttaagaggggggaaaggatttctcttcaccgtggctgacctccaggctggagtt
gttcgctatcatcatgatgacagcgactccaccaaagacttcgtggtcttccggatattt
gatggccatcacagcatccgtcacaaattccccatcaacgtcttgcccaaagatgatagt
cccccgttcctcataaccaatgttgtgattgaactggaggaggggcagaccattctgatc
cagggttccatgctgcgagcttcagatgtggacgccagtgatgactacatcttcttcaat
atcacaaagcctccacaggctgggcagatcatgaagaagccagggccaggagtgataggc
tatcctgtccctggcttccttcagagggatttgtttaatggaatcatttattatcgtcat
tttggtggagaaatctttgaagattcttttcaatttgtcctgtgggacagccatgaacct
ccaaatctttcagtgccacagatggcaacaatccatataactccagtggatgaccagctt
ccaaaagaggctcctggagtttctcggcatttggttgtcaaggaaactgaggtggcctat
ataactaagaaacagctacattttatagattcagaatcatatgacagggagctggtctac
acaataactactcctccatttttctccttcagccacagacacttggatgctgggaaatta
tttatggtggacagcataccaaaagtagttaagaatcctacggccctggagctgaggtca
ttcactcagcaagctgtgaactatatgaaagtggcctacatgccccccatgcaagacatt
ggtccccattgcagagatgtccagttcacattttctgtcagtaaccaacatggcagcact
ttgcatgggatctgctttaacattacaatactcccagtggacaatcaagttcctgaggtg
ttcaccaaccctctgaaagtgactgagggaggtcaaagtgtcatcagcacagagcacatt
ctgatttctgatgcagataccaagctggacaatattgacctctccctgcggggactgcct
ctgcatggaagggtggagctgaatggatttcctctaaattcagggggcacattttcttgg
ggcgatctccataccttaaaagttaggtatcaacatgatggatctgaagttcttcaggat
gacatactcttggaggtcaccgatggcacaaattcagcagaatttgttctacatgttgag
gtattccctgtcaacgatgagccaccagtcttaaaggctgacctcatgcctgtcatgaac
tgctcagagggaggagaggtggtcatcacctctgaatacatttttgctactgatgtggac
agcgataacttgaagttgatgtttgtgattgctcgcgaacctcagcatggggtggtgagg
agagctggagtcacagtggatcagttctctcagagagatgttatctcagaggccgtgaca
tacaaacacacaggtggcgagattggcatgatgccttgttttgacaccattacattggtg
gtttcggatggagaggctggcccttttgtgaatgtctgttgctacaatggacccaatcca
tctgttccgcttcatgcgtcctttccagtgtatgatctcaacatcacggtatacccagta
gacaaccagccaccttccattgcaataggtcccacgtttgttgtaaatgagggctgctca
agagcccttactgttaaccatttgtccgccactgaccctgacactgcagcagatgacttg
gaatttgttttggtttctcctcctcagtttggctaccttgaaaatatactcccttctgtg
ggttttgaaaaaagcaatattggcataagtatagattcatttcagtggaaagacatgaac
gcttttcacattaactatgtgcagtccaggcatctgaggatagaaccaactgccgaccag
ttcacggtgtacgtcacagatgggaagcaacactccttggagataccattttctgttata
atcaaccccacaaatgatgaagctcctgactttgtagtgcagaatattactgtgtgtgag
ggtcagatgaaagagttggactcttccatcatcagcgctgtggacctggacattccccag
gatgccctgctgttcagcatcactcaaaagccacgccatggcctcctcatcgataggggg
tttagcaaagacttctctgagaataagcagccagccagccctcaccagaaacatgcacct
gttcacagcttttccatggaactcctcaagactggaatgaggttgacgtatatgcatgat
gactcagagagccttgctgatgattttataatccaattgtcagatgggaaacataagata
cttaaaaccatttcagtagaggtcaccccagttaatgatgaaaaaccagtgctgagcaag
aaggctgaaattgcaatgaatatgggtgaaactcgtattatttctagtgctattctttca
gccatagatgaagactcgcccagggagaagatttactatgtatttgaaaggcttccccaa
aatgggcaacttcagcttaagatagggagggactgggttcctctctcccctggcatgaaa
tgcactcaggaggaagtggatctgaacttgctgagatactcacacaccggggcaatggat
tcccagaatcaagatagcttcaccttctacctttgggatggcgacaacaggtcccctgct
cttgactgtcaaatcaccatcaaggacatggagaaaggtgatattgtcatccttacaaaa
ccactcgtggtgtctaaaggtgatagaggtttcttaacaaccaccactctcctggctgtg
gacggaacagacaagcctgaggaactgctctatgtcatcacctcccctccacgatatggc
cagatcgaatatgttcactatcctggagttcccattacaagcttcagccaaatggatata
gtggggcagacagtttgctatgtacacaagagcaaggtgactgtctccagtgacagattc
agattcatcatcagcaatggactgcggaccgagcatggggtgtttgagatcacactggag
actgcggacagagccctgcctgtggtaaccaggaacaaggggttgagactggcccaaggg
gctgtgggcctgctttcccctgacctccttcagctgaccgaccctgatacacctgcggag
aacctcaccttcctcttggttcagctcccccagcatggccagctctacctgtgggggaca
gggctacttcaacacaattttacccagcaggatgtggacagcaggaatgtggcctatcgg
cactcaggaggggactcccagactgactgctttactttcatggccacagacagcacaaac
caaggctttattgtgaatgggagagtgtgggaaaaacctgttttattcaccattcaggta
gaccaattggacaaaacagctcctcgtatcacactcttgcattccccttctcaagtgggg
ctcctgaaaaatggctgctacgggctttatatcacttcccgcgtgttgaaggcatcagac
cctgacactgaggatgatcagatcatctttaaaattctacaaggcccaaaacatggacat
ctggagaacacaacaacaggtgaatttatccatgagaaatttagccaaaaggacttgaac
agtaagactattctttacatcataaacccatccttggaagtaaattcagataccatggaa
tttcaaatcatggaccccacagggaactcggccactcctcaaattttggaactgaagtgg
tctcatattgaatggtcacagaccgaatatgaagtctgtgagaatgtgggtgtgttgccc
ttggaaattatcagaaggggatattccatggactcggcctttgtgggtataaaggtcaac
caagtgtcagctacagttggaaaagatttcaccgtgactccatctaaactgattcagttt
gacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggattagaggaa
gatgatgaggtctttgaagtaattctgaactcccctgtgaatgcagttcttggcacaaag
acaaaagctgcagtgaaaattttggactcaaaaggaggacaatgccatccttcatattcc
tccaaccaaagcaagcacagcacatgggagaagggcatttggcgtctgctgcccccaggg
tcttcctcatccaccacttctggttcctttcatctggaaagaagacctcttccatcttcc
atgcagctagcagtcaccaggggagacaccctgcagggctttgattctacagatctttct
caaaggaagcttaggacccgtgggaatggcaaaacagtccgtccgtcctctgtttataga
aatggaacagacatcatctataattatcatgggatagtttccttgaaactggaggatgac
agtttcccaactcacaaaaggaaggccaaagtatccatcattagtcagccacaaaagaca
atcaaagtggcagaactgcctcaagcagataaggtggaatccacaactgactcacacttc
cccagacaggaccagttgccctcatttccaaagaactgcactctggaattaaagggactc
ttccattttgaagaaggcatccagaagctgtatcagtgcaatgggattgcctggaaagcc
tggagtccccaaaccaaggatgtggaagacaaatcctgtccagccgggtggcaccagcac
tcaggctactgtcacatcttgatcacagagcagaaaggcacctggaatgcggctgcccaa
gcttgcagggaacaatacctgggcaaccttgtaactgtattctccaggcagcacatgcgg
tggctctgggacattggtgggagaaagtccttttggataggtttgaatgaccaagcgcgt
gctggccactgggagtggatcggtggtgaacctgttgccttcaccaatgggagaagaggg
ccctctcaacgctccaagcttggaaagagctgtgttttggttcaaagacaagggaaatgg
caaacaaaagactgtaggagagccaaacctcataattatgtgtgttccagaaaactctaa
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