Pongo abelii (Sumatran orangutan): 100174771
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Entry
100174771 CDS
T01416
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03015
mRNA surveillance pathway
pon03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100174771 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100174771 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100174771 (CPSF6)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100174771 (CPSF6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
100174771
NCBI-ProteinID:
NP_001127689
Ensembl:
ENSPPYG00000004756
UniProt:
Q5NVH8
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Position
12:67124237..67158817
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AA seq
552 aa
AA seq
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MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTRWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPTGPGGPPPPFPAGQTPPRPP
LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPV
PGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPA
FFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNR
NRAISSSAISRAVSDASVGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGI
ESKSYGSGSRRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRD
RERDREREYRHR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgtggaccacatagacatttacgcggatgtcggcgaagaattcaaccag
gaagctgaatatggtgggcatgatcagatagatttgtatgacgatgtcatatctccatct
gcaaataatggagatgccccagaagaccgggattacatggatactctcccaccaactgtt
ggtgatgatgtgggtaaaggagcagcaccaaatgttgtctatacgtatactggaaagaga
attgcattatatattggaaatctaacacggtggacaacagatgaagacttaactgaagca
gttcattctttgggagtaaatgatattttggagataaaattttttgaaaatcgggcaaat
ggccagtcaaaggggtttgcccttgttggtgttggatctgaagcatcttcaaaaaagtta
atggatctgttgcctaaaagagaacttcatggtcagaatcctgttgtaactccatgcaat
aaacaattcctgagtcaatttgaaatgcagtccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggtcctccagggggcagttcccgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgttcctggtggggacagatttcctgggcca
acaggaccaggagggccacccccaccttttccagctggacagactccaccacgtccaccc
ttaggtcctccaggcccacctggtccaccaggtcctccacctcctggtcaggttctgcct
cctcctctagctgggcctcctaatcgaggagatcgccctccaccaccagttctttttcct
ggacaaccttttgggcagcctccattgggtccacttcctcctggccctccacctccagtt
ccaggctacggcccccctcctggcccaccacctccacaacagggaccgcctccacctcca
ggcccttttccacctcgtccacccggtccacttgggccaccccttacactagctcctcct
ccgcatcttcctggaccacctccaggtgccccaccgccagctccgcatgtgaacccagct
ttctttcctccaccaactaacagcggcatgcctacatcagatagccgaggtccaccacca
acagatccatatgggcgacctccaccatatgataggggtgactatggcccccctggaagg
gaaatggatactgcaagaacgccattgagtgaagctgaatttgaagaaatcatgaataga
aatagggcaatctcaagcagtgctatttcgagagctgtgtctgatgccagtgttggtgat
tatgggagtgctattgagacattggtaactgcaatttctttaattaaacaatccaaagta
tccgctgatgatcgttgcaaagttcttattagttctttgcaagattgccttcatggaatt
gagtccaagtcttatggttctggatcaagaagacgtgaacgatcaagagagagggaccat
agtagatcacgagaaaagagtcgacgtcataaatcccgtagtagagaccgtcatgacgat
tattatagagagagaagcagagaacgagagaggcaccgggatcgtgaccgagaccgtgac
cgagaacgtgaccgagagcgcgaatatcgtcatcgttag
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