Pongo abelii (Sumatran orangutan): 100442261
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Entry
100442261 CDS
T01416
Symbol
SCAF1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor, arginine/serine-rich 19
Organism
pon
Pongo abelii (Sumatran orangutan)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4211
Sec1
Motif
Other DBs
NCBI-GeneID:
100442261
NCBI-ProteinID:
XP_024092620
Ensembl:
ENSPPYG00000010259
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Position
19:47971029..48032985
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AA seq
2374 aa
AA seq
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MPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGALEPLPPAPGDTGVGPPNSE
GKDPAGAYRSPSPQGTKAPRFVPLTSICFPDSLLQDEERSFFPTMEEMFGGGAADDYGKA
GPPEDEGDPKAGAGPPPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKPPELPSTVNAE
PLGLIQSGPHQAAPPPPPPPPPPPAPASEPKGGLTSPIFCSTKPKKLLKTSSFHLLRRRD
PPFQTPKKLYAQEYEFEADEDKADVPADIRLNPRRLPDLVSSCRSRPALSPLGDIDFCPP
NPGPDGPRRRGRKPTKAKRDGPPRPRGRPRIRPLEVPTTAGPASASTPADGAKKPRGRGR
GRGRKAEEAGGTRLEPLKPLKIKLSVPKAGEGLGTSSGDAISGTDHNSLDSSLTREKIEA
KIKEVEEKQPEMKSGFMASFLDFLKSGKRHPPLYQAGLTPPLSPPKSVPPSVPARGLQPQ
PPATPAVPHPPPSGAFGLGGALEAAESEGLGLGCPSPCKRLDEELKRNLETLPSFSSDEE
DSVAKNRDLQESISSAISALDDPPLAGPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSN
GTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPP
PPAMPSPPPXPPPAAAPLAAPPEEPAAPSPEDPELPDTRPLHLAKKQETAAVCGETDEEA
GESGGEGIFRERDEFVIRAEDIPSLKLALQTGREPPPIWRVQKALLQKFTPEIKDGQRQF
CATSNYLGYFGDAKNRYQRLYVKFLENVNKKDYVRVCARKPWHRPPVPVRRSGQAKNPAS
AGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPTAPEKPSLLRPVEKEKEKE
KVTRGERPLRGERATSGRQTRPERSLATGQPATSRLPKARPTKVKAEPPPKKRKKWLKEA
GGNAAAGGGPPGSSSDSESSPGAPSEDERAVPGRLLKTRAMREMYRSYVEMLVSTALDPD
MIQALEDTHDELYLPPMRKIDGLLNEHKKKVLKRLSLSPALQVTMEEEDESRGKMEESGE
DQGDGPPDRDPTLSPSAFILRAIQQAVGSSLQGDLPNDKDGSRCHGLRWRRCRSPRSEPR
SQESGGTDTATVLDMAADSFLAGLVSVLDPPDTWVPSRLDLRPGESEDMLELVAEVRIGD
RDPIPLPVPSLLPRLRAWRTGKTVSPQSNSSRPTCARHLTLGTGDGGPAPPPAPSSASSS
PSPSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTDEAYSPPPAPEQKYDPFEPTGS
NPSSSAGTPSPEEEEEEEEEEEEEEEDEEEEEGLSQSISRISETLAGIYDDNSLSQDFPG
DESPRPDPQPTQPTPAPGTPPQVDSTRADGAMRRRVFVVGTEAEACREGKVSVEVVTAGG
AALPPPLLPPGDSEIEEGEIVQPEEEPRVALSLFRPGGRAARPPPASSATPTAQPLPQPP
APRAPEGDDFLSLHAESDGEGALQVDLGEPAPAPPAADSRWGGLDLRRKILTQRRERYRQ
RSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHR
SRDRKPGSHASSSARRRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPA
TSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKRSGDGSEKAPAPAPPPSGSTSGGDR
DSRRRGAVPPSIQDLTDHDLFAIKRTITVGRLDKSDLRGPSPAPASSPKREVLYDSEGLS
GEERGGKSSQKDRRRSGAASSSSSSREKGSRRKALDGGDRDRDRDRDRDRDRSSKKARPP
KESAPSSGPPPKPPVSSGSGSSSSSSSCSSRKVKLQSKVAVLIREGVSSTTPAKDAASAG
LGSIGVKFSRDRESRSPFLKPDERAPTEMAKAAPGSTKPKKTKVKAKAGAKKAKGTKGKT
KPSKTRKKVRSGGGSGGSGGQVSLKKSKADSCSQAAGTKGAEETSWSGEERAAKVPSTPP
PKVAPPPPALTPDSQTVDSSCKTPEVSFLPEEATEEAGVRGGAEEEEEEEEEEEEEEEEE
EQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDGPASRVSQLPTLPPPMPWNLPAGVDC
TTSGVLALTALLFKMEEANLASRAKAQELIQATNQILSHRKPPSSLGVTPAPVPTSLGLP
PGPSSYLLPGSLPLGGCGSTPPTPTGLAATSDKREGSSSSEGRGDTDKYLKKLHTQERAV
EEVKLAIKPYYQKKDITKEEYKDILRKAVHKICHSKSGEINPVKVSNLVRAYVQRYRYFR
KHGRKPGDPPGPPRPPKEPGPPDKGGPGLPLPPL
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgcccctacagctcgaggcccacctccgcagccatggcctggagcccgcggcccccagc
ccccgcctgcgaccagaggagagcctggatccgccaggcgccatgcaggaattgctcggg
gctctggagccgctgcccccggcgcctggggacaccggtgtaggcccgccaaactcggag
ggcaaggatcccgcaggcgcctaccgcagccccagcccgcaaggcaccaaggcgccgcgc
ttcgtgccgctcacctccatctgcttccctgactccttgctccaagacgaggagcgcagc
ttcttccccaccatggaggagatgttcggtggaggggccgcggacgactatggcaaggcc
gggccacctgaggacgagggggaccccaaggcgggtgctgggccaccccccggcccccct
gcctatgatccctatgggccctactgtcctggccgggcgtcgggagccgggcccgagaca
ccaggcctgggcctggaccccaacaagccgcctgaactgccctccacggtcaacgccgag
ccgctgggcctgatccagagcggtccccaccaggcggcgccaccacccccacctccgcca
ccgccgcctcccgcaccggcctccgagcccaagggtggcctcacctcgcccatcttctgc
tctaccaagccaaagaagctgctcaagacgtcctccttccacctgctgcggcgccgcgac
ccacccttccagacccccaagaagctgtacgcccaggagtacgagttcgaggcggacgag
gacaaggccgatgtgcccgccgacatccgcctcaacccccggcgcttgcctgacctggtc
tccagctgccgctcccgcccggccctctcgccactgggggacatcgacttctgcccaccc
aacccgggacccgatggcccccggcgccgtggccgcaagcccacaaaggcgaagcgtgat
gggccaccccggccacgggggaggccccggatccgcccgctggaggtccccaccactgcg
gggcccgcctcggcctccacgcccgctgatggcgccaagaaaccccggggccggggccga
ggccggggtcgaaaggctgaggaggcagggggcacccggttggagcccctgaagccactt
aagatcaagctgtctgtgcccaaggctggcgagggtctgggaacctcatcaggtgatgcc
atatcaggcactgaccacaacagcctggactccagcctgactcgggagaagatcgaggcc
aagattaaggaggtggaggagaagcagccggagatgaagtcgggtttcatggcctccttc
ttggacttcctcaagtcaggcaagcgccacccaccactctaccaggcgggcctgacgcct
ccgctcagccctcccaagagtgtgccaccctctgtgccagcccgaggcctgcagccccag
ccccctgccacccctgctgtgccacatcccccaccttccggagcctttgggcttgggggt
gccctggaggctgcggagagtgaggggctggggctcggctgcccttcaccctgcaagcgg
ctggatgaggagctgaagcggaacctcgagacgctgccctccttctcctcggacgaggaa
gattctgtcgccaagaaccgagatctgcaggagagcatctcctctgccatctctgccctc
gatgacccaccccttgctgggccaaaggacacttccaccccagatgggccgcccttggcc
cccgcggctgcagttccagggccaccccctcttccggggctacccagtgccaacagcaat
ggcactcccgagcccccgctgctggaggagaaacccccacccactccacctcctgccccg
actcctcagcctcagcctccgccaccccctccgccgccacagccagccctgccctcgcca
cccccgctggtggcccccacgcccagctcaccaccaccaccgccgctgccgccgccacct
ccaccagccatgccctcgcctccaccancccccccaccagccgctgccccactggctgct
cctcccgaggagcccgccgccccgtcccccgaagaccccgagctgccggacacccggccc
ctgcatctagccaaaaagcaggagacggcggccgtgtgtggggagacggacgaggaggcc
ggcgagagtggcggggagggcatcttccgggaacgggacgagtttgtcatccgtgccgag
gacatcccttccctcaagctggcgttgcagacggggcgcgaacccccacccatctggcga
gtccagaaggcccttctgcagaaattcactccggagatcaaggacggccagaggcagttt
tgtgccaccagtaattatttggggtattttggggatgcaaaaaatcggtaccagcgcctc
tatgtaaagttcctggaaaatgtcaataagaaggactacgtgagggtctgtgctcggaaa
ccctggcatcggcccccagtgccagtcagacgctctgggcaggccaagaaccccgcatct
gctgggggtagctctgcacctccccctaaggccccagcaccacctcccaagcctgagacc
cctgaaaagacgacatctgagaagcccccagagcagacacctgagacggccatgcctgag
cccactgcccctgagaagccctccctcctgcggcctgtcgagaaggaaaaggagaaggag
aaggtgacgcgtggggagcggccattacggggtgagcgggccaccagcggacggcagacg
cggccagagcggagcctcgccacgggacagcctgccacatcccggctgcctaaagcccgg
cctaccaaggtgaaggctgaaccgcctcctaagaagaggaagaaatggctgaaggaggca
gggggcaacgctgcagcaggcgggggcccaccaggcagctcctcggactcggagtcctcc
cctggagcccccagcgaggacgagcgggcagtacctgggcgtctgctcaaaaccagggcg
atgcgggagatgtaccggagctacgtggagatgttggtgagcacagcacttgacccagac
atgatccaggccctggaggacacgcatgacgaactgtacctgcctcccatgcggaagata
gacggcctgctgaatgagcacaagaagaaagtcctgaagcggctgtcgctaagcccagcc
ctgcaggtgaccatggaggaagaagatgaatctcgagggaagatggaagagtcgggcgag
gatcagggtgatggtccgccagacagagaccccacgctttctccttctgcctttatcctg
cgagccatccagcaggctgtgggaagctccctgcagggggacctgcccaatgataaagat
ggctctcggtgtcatggccttcgatggcggcgctgccggagtccacggtcagagccccgt
tcccaggaatcagggggcactgacacggctactgtgttggacatggccgcggacagcttc
ctcgcagggctggtgagtgtcctggatcctccggatacctgggttcccagccgcctggac
ctgcggcctggcgaaagcgaggacatgctggagctggtggctgaggtccgaatcggggat
agagatcccatccctctgcctgtgcccagcctgctgccccgtctcagggcctggaggacg
ggcaaaacggtttctccacagtcgaactcctctaggcccacctgtgcccgtcacctcacc
ttgggcacgggagacgggggccctgccccaccccctgccccctcctctgcatcctcttcc
ccttccccttctccctcatcttcctccccttcccctcccccgcccccaccgccccctgca
cccccagccccacctgccccccgattcgatatctatgaccccttccaccccaccgacgag
gcctactctccaccgcctgctccggagcaaaagtacgaccctttcgagcccactggctcc
aaccccagctcatcagccgggaccccctcacctgaggaggaagaggaggaggaggaggag
gaagaagaggaagaggaagacgaggaggaggaggaaggcctgtcccagagcatcagccgc
atctcggagaccctggcgggcatctacgacgacaacagcctgagccaggacttcccaggt
gacgagagcccccgcccggacccgcagcccacacagccgactccggcccctggaacgccg
ccccaggtggactccacccgggctgatggagccatgcgccggcgggtcttcgtggtgggg
accgaggcagaggcctgtcgggaaggcaaggtctcggtggaggtggttaccgctggtgga
gccgccctcccgccgccactgctgccaccaggcgactcggagatcgaggaaggcgagatc
gtccagccggaggaggagcccagggtggcgctgtccctcttccgccccggcggccgggcc
gcccggcctccgccggcctcctcggccacccccacggcccagccccttccccagcctccc
gctccccgggcccccgagggggacgacttcttgtccctgcatgcggagtcggacggcgag
ggcgccctgcaggtggacctgggggagccggctcccgcgccgcccgccgccgactcgcgc
tggggcggcctggacctgcgccgcaagatcctgacccagcggcgggagcgctaccgccag
cgctcgccctccccggcgcccgcacccgccccggccgccgctgctggtccgcccacacgc
aagaagtccaggcgggaacgcaagcgcagcggcgaggccaaggaggccgcctcgtcctcg
tcgggcacccagcccgcgccgcccgccccggcctcgccctgggactccaagaagcatcgc
tcgcgggaccgcaagcccggctcccacgcctcatcgtccgcccgccgccgctcccgctcc
cgttcccgctccacccgccgccgctcacgaagcaccgaccgccgccgcgggggcagccgc
aggtcgcggtctcgggagaagcggcgacggcggcggcgctccgcctccccgcccccggcc
acctcctcatcgtcgtcctcgaggcgcgagcggcaccgcgggaaacaccgggacggtggc
ggcagcaagaagaagaagaagcggtcgcggtcccggggtgagaagcggtctggggatggc
agcgagaaggccccggcgcccgccccgccgccctccggctccacctcgggtggtgaccgc
gacagccgccgccggggggccgtgccaccctccatccaggacctcacggaccacgacctc
ttcgccatcaagcggaccatcacggtgggccggcttgacaagtccgacctccgaggaccc
tctcctgccccggcctcgtcacctaagcgggaggtcctgtacgactccgagggactgagc
ggcgaggagcggggcggcaagagcagccagaaggatcggcgccgctcgggggccgcctcc
tcctcctcctcctcccgggagaaggggtctcgtcggaaggcgctggacgggggtgaccgg
gatcgggacagggacagagatagggacagggacaggtcatccaagaaggcccggcccccc
aaggagtcggcgccttcctcagggcccccgccaaagccaccagtcagcagcggctcaggc
tcttcatcctcgtcctcctcctgttcttcccggaaagtgaagctgcagtccaaggtggcg
gtgctgatccgcgagggtgtcagcagcaccaccccagccaaggatgccgcatcagccggc
ctgggctccattggcgtcaaattcagccgtgaccgcgagagtcgctcccccttcctcaaa
cctgacgagcgggcccccactgagatggccaaagcagctccgggcagcaccaagcccaaa
aagaccaaggtcaaggccaaggcaggggccaagaaagccaaggggaccaagggaaagacc
aagccatccaagaccaggaaaaaggtccgcagcggaggtggcagcgggggcagtggcggc
caagtgtcgctaaagaagtccaaggcagatagctgcagccaggcggcaggcaccaaggga
gcggaggagacttcctggtccggggaggagcgggcagccaaggttcctagcaccccgccc
cccaaggtagccccaccaccccctgccctcactccggactcgcagaccgtggacagcagc
tgcaagacacctgaggtctccttcctgcccgaggaggccactgaggaggctggggtccga
ggtggggcagaggaggaggaggaggaggaagaagaggaggaggaggaggaagaggaggag
gagcagcagcctgctaccaccacggccaccagcactgctgcagctgccccaagcactgcc
cccagcgcggggtccacagccggtgactcgggggcggaggacgggccagcttcccgtgtc
tcccagctgcccacgctgcccccgcccatgccctggaatctgccggctggtgtggactgc
accaccagcggcgtcctggccttgactgcacttctcttcaagatggaagaagccaacctg
gcgagccgagcgaaggcccaggagctgatccaggccaccaaccagatcctcagccacaga
aagccaccctcaagtctgggggtgaccccagctcctgtgcccacctctttgggtctgccc
cctggcccctccagctacctgcttcctggcagcctccctctggggggctgcggttcgacc
cccccaacccccaccgggctggctgccacgtctgacaagagagagggcagcagcagctct
gagggccgtggggacacagataagtatctgaagaagctgcacacgcaggagcgggcggtg
gaggaggtgaagctggccatcaagccgtactatcagaagaaggacatcaccaaggaggag
tataaggacatcctgaggaaggccgtccacaagatctgccacagcaaaagtggggagatc
aacccggtgaaggtgagcaacctggtgcgggcctacgtccagcgctaccgctacttccgc
aagcacggtcgcaagccaggggaccccccagggcccccacggccgcccaaggagccaggg
cccccggacaagggtggcccgggcctgcccctgccccctctctga
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integrated database retrieval system
