Pongo abelii (Sumatran orangutan): 100445828
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Entry
100445828 CDS
T01416
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03022
Basal transcription factors
pon03420
Nucleotide excision repair
pon05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100445828 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
100445828 (GTF2H4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100445828 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100445828 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
pon03400
]
100445828 (GTF2H4)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100445828 (GTF2H4)
DNA repair and recombination proteins [BR:
pon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100445828 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
100445828
NCBI-ProteinID:
XP_002816695
Ensembl:
ENSPPYG00000016423
UniProt:
A0A6D2X0M5
LinkDB
All DBs
Position
6:30910380..30916295
Genome browser
AA seq
462 aa
AA seq
DB search
MESTPSRGLNRVHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRML
FLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLRI
ALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLS
QAGLMKSTEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQL
SFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGGT
VHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGIT
AQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFEL
LLAHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaccccttcaaggggactgaaccgagtacacctacaatgcaggaatctgcag
gaattcttagggggcctgagccctggggtattggaccgattgtatgggcaccctgccact
tgtctggctgtcttcagggagctcccatccttagctaagaactgggtgatgcggatgctc
tttctggagcagcctttgccacaagctgctgtagccctgtgggtaaagaaggaattcagc
aaggctcaggaggaaagtacagggctgctgagcggcctccggatctggcacacccagctg
ctcccaggcgggctccagggcctcatcctcaaccccattttccgccagaacctccgcatt
gcccttctgggtggggggaaggcctggtctgatgacacaagtcagctgggaccagacaag
catgcccgggatgttccctcccttgacaagtatgccgaagagcgatgggaggtggtcttg
cacttcatggtgggctcccccagtgcagctgtcagccaggacttggctcagctcctcagc
caggctgggctcatgaaaagtactgaacctggagagccaccctgcattacttccgctggc
ttccagttcctgttgctggacaccccggctcagctctggtactttatgttgcagtatttg
cagacagcccagagccggggcatggacctagtagagattctctccttcctcttccagctc
agcttctctactctgggcaaggattactctgtggaaggtatgagtgattctctgttgaac
ttcctgcaacatctgcgtgagtttgggcttgttttccagaggaagaggaaatctcggcgt
tactaccccacacgcctggccatcaatctctcatcaggtgtctctggagctgggggcact
gtgcatcagccaggtttcattgtcgtggaaaccaattaccgactgtatgcctacacggag
tcggagctgcagattgccctcattgccctcttctctgagatgctctatcggttccccaac
atggtggtggcgcaggtgacccgggagagtgtgcagcaggcaatcgccagtggcatcaca
gcccagcagataatccatttcttaaggacaagagcccacccagtgatgctcaaacagaca
cctgtgctgccccccaccatcaccgaccagatccggctctgggagctggaaagggacaga
ctccggttcactgagggtgtcctgtataaccagttcctgtcgcaagtggactttgagctg
ctgctagcccacgcgcgggagctgggcgtgctcgtgttcgagaactcggccaagcggctc
atggtggtgacaccggccgggcacagcgacgtcaaacgcttttggaagcggcagaaacac
agctcctga
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