Pongo abelii (Sumatran orangutan): 100455011
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Entry
100455011 CDS
T01416
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pon04040
]
100455011 (SCN10A)
Ion channels [BR:
pon04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100455011 (SCN10A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
CcmD_alt
Na_trans_cytopl
Motif
Other DBs
NCBI-GeneID:
100455011
NCBI-ProteinID:
XP_009237473
Ensembl:
ENSPPYG00000014003
LinkDB
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Position
3:103142109..103238067
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AA seq
1959 aa
AA seq
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MEFPIGSLENNNFRRFTPESLVEIEKQIAAKQATKKAREKHREQKDQEEKARPQLDLKAC
NQLPKFYGELPAELIGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITVTILVNCVCMTRTDLPEKIEYVFTVIYTFEALIKILARGF
CLNEFAYLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVKKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNDMAVNETTNYSSHRKRDI
YINKRGTSDPLLCGNGSDSGHCPDGYICLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDS
WERLYQQTLRASGKIYMIFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKEKK
FQEALEILQKEQEVLAALGIDTTSLHSHNGSPLNSKNASERRHRLKPTVSEGSTEDNKSP
RSDPYNQRRMSFLGLTSGKRRASHGSVFHFWSPGRDTSLPEGVTDDGVFPGDHESHWGSL
LLGGGAGQQGPFPRSPLPQPSNPDSRHGEDEHQPPPTSELAPGAVDVSAFDAGQKKTFLS
AEYLDEPFRAQRAMSVVSIITSVLEELEESEQKCPPCLTSLAQKYLIWDCCPMWMKLKTI
LFGLVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKII
AFDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTLI
KIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYRNNRKNISAPHEDWPRWHMHDFFH
SFLIVFRILCGEWIENMWACMEVGQKSVCLILFLTVMVLGNLVVLNLFIALLLNSFSADN
LTAPEDDGEVNNLQVALARIQVFGHRTKQALCSFFSRPCPFPRPKAEPELVVKLPLSSSK
AENHIAVNTARGSSGGLQAPRGPRDEHSDFIANPTVWVSVPIAEGESDLDDLEDDGEEDA
QSSQQEVIPKGQQEQLQQVERCEDHLTPRSPGTGTSSEDLAPSLGETWKAESVPQAPAEG
VDDTSSSEGSTVDCPDPEEILRKIPELADDLEEPDDCFTEGCIRHCPCCKVDTTKSPWDV
GWQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIF
VFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALRP
LRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINYTDGE
FSLVPLSIVNNKSDCKIQNSTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAV
DSREVNMQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVET
DDQSEEKTKILGKINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVVLSIASLIFS
AILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYSIFGMSSFPHVRWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPY
CDPNLPNSNGTRGDCGSPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLS
EDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNILIQMDLPLVPGDK
IHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKSSYEPIATTLRWKQEDISATV
IQKAYRSYVLHRSMALSNTPCVPRAEEEAASLPDESFVPFTANENCVLPDKSETASATSF
PPSYESVTRGLSDRVNMRTSSSIQNEDEATSTEVIAPGP
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggaattccccattggatccctcgaaaataacaacttccgtcgctttactccggagtca
ctggtggagatagagaagcaaattgctgccaagcaggcaacaaagaaagccagagagaag
catagggagcagaaggaccaagaagagaaggctcggccccagctagacttgaaagcctgc
aaccagctgcccaagttctatggagagctcccagcagaactgatcggggagcccctggag
gatctagaccccttctacagcacacaccggacattcatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggctattcagtcctttcaacctgatcaga
agaacggccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttattaca
gtcactattttggttaattgtgtgtgcatgacccgaactgaccttccagagaaaattgaa
tatgtcttcactgtcatttacacctttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagttcgcgtacctgagagatccttggaactggctggattttagcgtcatt
accctggcatatgttggcacagcaatagatctccgtgggatctcaggcctgcggacattc
agagttcttagagcattgaaaacagtttctgtgatcccaggcctgaaggtcattgtgggg
gccctgattcactcagtgaagaaactggctgatgtgaccatcctcaccatcttctgccta
agtgtttttgccttggtggggctgcaactcttcaagggcaacctcaaaaataaatgtgtc
aagaatgatatggctgtcaatgagacaaccaactactcatctcacagaaaacgagatatc
tacataaataagcgaggcacttctgatcccttactgtgtggcaatggatctgactcaggc
cactgccctgatggttatatctgccttaaaacttctgacaacccggattttaactacacc
agctttgattcctttgcttgggctttcctctcactgtttcgcctcatgacacaggattcc
tgggaacgcctctaccagcagaccctgagggcttctgggaaaatctatatgatctttttt
gtgctcgtaatcttcctgggatctttctacctggtcaacttgatcttggctgtagtcacc
atggcgtatgaggagcagaaccaggcaaccattgatgaaattgaagcaaaggagaagaag
ttccaggaggccctcgaaatactccagaaggagcaggaggtgctagcagcgctagggatt
gacacaacctctctccactcccacaatggatcacctttaaactccaaaaatgccagtgag
agaaggcatagattaaagccaacagtgtcagagggttccacagaagacaacaaatcaccc
cgctctgatccttacaaccagcgcaggatgtcttttctaggcctcacctctggaaaacgc
cgggctagtcatggcagcgtgttccatttctggtcccctggccgagatacctcactccct
gagggagtcacagatgatggagtctttcctggagaccacgaaagccattggggctccctg
ctgctgggtgggggtgctggccagcaaggccccttccctagaagccctcttcctcaaccc
agcaatcctgactccaggcatggagaagatgaacaccaaccgccacccactagtgagctt
gcccctggagctgtcgatgtctcggcattcgatgcaggacaaaagaagactttcttgtca
gcagaatacttagatgaacctttccgagcccaaagggcaatgagtgttgtcagtatcata
acctccgtccttgaggaactcgaggagtctgaacagaagtgcccaccctgcttgaccagc
ttggctcagaagtatctgatctgggattgctgccccatgtggatgaagctcaagacaatt
ctctttgggcttgtgacggatccctttgcagagctcaccatcaccttgtgcatcgtggtg
aacacgatcttcatggccatggagcaccatggcatgagccctaccttcgaagccatgctc
cagataggcaacattgtctttaccatattttttactgctgaaatggtcttcaaaatcatt
gccttcgacccatactattatttccagaagaagtggaatatctttgactgcatcatcgtc
actgtgagtctgctagagctgggcgtggccaagaagggaagcctgtctgtgctgcggagc
ttccgcttgctgcgcgtcttcaagctggccaagtcctggcccaccttaaacacactcatt
aagatcatcggaaactcagtgggggcactggggaacctcaccatcatcctggccatcatt
gtctttgtctttgctctggttggcaagcagcttctaggggaaaactaccgtaacaaccga
aaaaatatctccgcgccccatgaagactggccccgctggcacatgcacgacttcttccac
tctttcctcattgtcttccgtatcctctgtggagagtggattgagaacatgtgggcctgc
atggaagtcggccaaaaatccgtatgcctcatccttttcttgacggtgatggtactaggg
aacctggtggtgcttaacctgttcatcgccctgctattgaactctttcagtgctgacaac
ctcacagccccagaggacgatggggaggtgaacaacctgcaggtggccctggcacggatc
caggtctttggccatcgtaccaagcaggctctttgcagcttcttcagcaggccctgccca
ttcccccggcccaaggcagagcctgagctggtggtgaaactcccactctccagctccaaa
gctgagaaccacattgctgtcaacactgccagggggagctctggagggctccaagctccc
agaggccccagggatgagcacagtgacttcattgctaatcctactgtgtgggtctctgtg
cccattgctgagggtgaatctgatcttgatgacttggaggatgatggtgaggaagatgct
cagagctcccagcaggaagtgatccccaaaggacagcaggagcagctgcagcaagtcgag
aggtgtgaggaccacctgacacccaggagcccaggcactgggacatcttctgaggacctg
gctccatccctgggtgagacgtggaaagctgagtctgttcctcaggcccctgctgaggga
gtggatgacacaagctcctctgagggcagcacggtggactgcccagatcctgaggagatc
ctgaggaagatccctgagctggcagatgacctagaagaaccagatgactgcttcacagaa
ggatgcattcgccactgtccctgctgcaaagtagataccaccaagagtccatgggatgtg
ggctggcaggtgcgcaagacttgctaccgtatcgtggagcacagctggtttgagagcttc
atcatcttcatgatcctgctcagcagtggatctctggcctttgaagactattacctggac
cagaagcccactgtgaaagctttgctggagtacactgacagggtcttcacctttatcttt
gtgttcgagatgctgcttaagtgggtggcctatggcttcaaaaagtacttcaccaatgcc
tggtgctggctggacttcctcattgtgaatatctcactgataagtctcacagcgaagatt
ctggaatattctgaagtggctcccatcaaagcccttcgaactcttcgcgctctgcggcca
ctgcgggctctgtctcgatttgaaggcatgcgggtggtggtggatgccctggtgggcgcc
atcccatccatcatgaatgtcctcctcgtctgcctcatcttctggctcatcttcagcatc
atgggcgtgaacctcttcgcagggaagttttggaggtgcatcaactataccgatggagag
ttttcccttgtacctttgtcgattgtgaataacaagtctgactgcaagattcaaaactcc
accggcagcttcttctgggtcaatgtgaaagtcaactttgataatgttgcaatgggttac
cttgcacttctacaggtggcaacctttaaaggctggatggacattatgtatgcagctgtt
gattcccgggaggtcaacatgcaacccaagtgggaggacaacgtgtacatgtatttgtac
tttgtcatcttcatcattttcggaggcttcttcacactgaatctctttgttggggtcata
attgacaacttcaatcaacagaaaaaaaagttagggggccaggacatcttcatgacagag
gagcagaagaagtactacaatgccatgaagaaactgggctccaagaagccccagaagccc
atcccacggcccctgaacaagttccagggttttgtctttgacatcgtgaccagacaagct
tttgacatcaccatcatggtcctcatctgcctcaacatgatcaccatgatggtggagact
gatgaccagagtgaagaaaagacaaaaattctgggcaaaatcaaccagttctttgtggcc
gtcttcacaggcgaatgtgtcatgaagatgttcgctttgaggcagtactacttcaccaat
ggctggaatgtgtttgacttcattgtcgtggttctctccattgcgagcctgattttttct
gcaattcttaagtcacttcaaagttacttctccccgacgctcttcagagtcatccgcctg
gcccgaattggccgcatcctcagactgatccgagcggccaaggggatccgcacactgctc
tttgccctcatgatgtccctgcctgccctcttcaacatcgggctgctgctcttccttgtc
atgttcatctactccatcttcggtatgtccagctttccccatgtgaggtgggaggctggc
atcgacgacatgttcaacttccagaccttcgccaacagcatgctgtgcctcttccagatc
accacgtcggccggctgggatggcctcctcagccccatcctcaacacagggcccccctac
tgtgaccccaatctgcccaacagcaatggcaccagaggggactgtgggagcccagccgta
ggcatcatcttcttcaccacctacatcatcatctccttcctcatcgtggtcaacatgtac
attgcagtgattctggagaacttcaatgtggccacggaggagagcaccgagcccctgagt
gaggatgactttgacatgttctatgagacctgggagaagtttgacccagaggccactcag
tttattaccttttctgctctctcggactttgcagacactctctctggtcccctgagaatc
ccaaaacccaatcgaaatatactgatccagatggacctgcctttggttcctggagataag
atccactgcttggacatcctttttgctttcaccaagaatgtcctaggagaatccggggag
ttggattctctgaaggcaaatatggaggagaagtttatggcaactaatctttcaaaatca
tcctatgaaccaatagcaaccactctccgatggaagcaagaagacatttcagccactgtc
attcaaaaggcctatcggagctatgtgctgcaccgctccatggcactctctaacacccca
tgtgtgcccagagctgaggaggaggctgcatcactcccagatgaaagttttgttccattc
acagcaaatgaaaattgtgtactcccagacaaatctgaaactgcatctgccacatcattc
ccaccatcctatgagagtgtcactagaggccttagtgatagagtcaacatgaggacatct
agctcaatacaaaatgaagatgaagccaccagtacagaggtgattgcccctgggccctag
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integrated database retrieval system
