Populus trichocarpa (black cottonwood): 18096977
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Entry
18096977 CDS
T01077
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
18096977
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18096977
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
18096977
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
18096977
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
18096977
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
18096977
NCBI-ProteinID:
XP_006385660
UniProt:
A0A2K2B467
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All DBs
Position
3:11870262..11874793
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AA seq
809 aa
AA seq
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MEVSTEAGVDVPSKTKTLDSKSFIQAYGFSTQSQIEALNNELLGDPVISPNSELSCGGQY
LVPLSSNSNGFSLTSTSMPRSEETLIGTLLPHILTSGSQISVSSQSNQDWSGSLVANGNE
DGFLLDSDQRLVARCDTDNGIFDDNREPDSPMRVELELENSWLVHGDVEHEEEVFGDDGE
KEDPRQLFRCEPNYHPMYHHRRGHFDPEFHENHPDLSPSSIKRFRGSQVPQWRNRWDDRE
KTRNQEYGPPGFMQETGPTGVGAGLFNKGNTCYINAVLQCFTHTVPLVQALRSCNHAMPC
RTEGFCALCVIRDHIELSLASSGKILEPLKLVNNLDSISSFFRRYQQEDAHEFLQCLLER
LERSCLDSSLTDDISSSQDKNIVERVFGGRLVSKLRCCNCGHFSDKYEPLIDLSLEIEDA
DTLQIALESFTNVEKIEDSETKFTCENCKEEVSREKQLMLDKAPSIAALHLKRFKIDGTS
VEKIGKHVEFPLELDLKPYINDNDSNDVGFKYQLYAVVVHKGYSLTSGHYVCYIRSSPDT
WHKLDDPEVSKEREEFVLSQAAYILFYAREGTPWCSSLIKPQEFCLDRSNSNTSPKSVLD
NANSECISVADKDSLETSVIKDAVEATSTHIPCEREFEEIVSRGETEGISFQISCANMVD
VSLPHGVSDGHDGVLHDEMLCFPPVEEDYSNQCAEKIGRKGDLRPSAPPRSPTSDVYSGE
LPEARRCIPREHLKVENHVNCKRSSKKGTKDSQTAEALRCIKRMPTARGMKLMAALLPRN
DKTRPRSSPCKRASPPGSRRKPIRVAVIR
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttcaactgaagcaggcgttgacgtgccttctaaaaccaaaaccctagattcc
aaatcttttattcaggcttatggcttttctacccagtcacagattgaagccctaaataac
gagctgctcggagaccctgtgatttcccccaattccgagttaagctgtggaggccaatat
ttggttcctctatcatcaaattcaaatgggttttcactaacttcaacttcaatgcctcgc
tctgaagaaaccctaatcggcactttgcttcctcatatcttaacctcaggtagccagatt
tcggtttcttcccagtcaaatcaggactggtctgggtctttagtagctaatggtaacgaa
gatgggtttctattggattctgaccagcgcttggtcgctcgttgtgatactgacaatggt
atttttgatgataatagagaacctgattcacctatgcgagtagaactagaacttgagaat
tcgtggcttgttcatggagatgttgagcatgaggaagaggtttttggtgatgatggtgag
aaagaggatccaaggcaactttttcgttgtgaacctaattatcacccaatgtatcatcat
cgtcggggtcattttgatcctgaattccatgaaaatcatccggatttgtctccttcttcg
attaagaggtttcgtggatcacaggttcctcaatggaggaatcgttgggatgacagagag
aagacaaggaatcaagaatacgggcctcctggttttatgcaggaaactggacctactggt
gtgggtgctgggctttttaataaaggaaacacatgctatattaatgcagtcctgcaatgc
tttacgcatacggtgcctcttgttcaggctcttcgttcttgcaaccatgcaatgccctgt
agaactgaaggattctgtgctctttgtgttatccgtgatcacattgaactttctttagct
tcatctggaaagatcctcgagcctttgaaacttgtcaacaatttggacagtatttcatca
ttttttcgtcgatatcagcaggaagatgcccatgaattcctccaatgcttgttagaaaga
cttgagaggagctgtttggattcaagcctcactgatgacatctcatcctcccaagataag
aacatagttgagcgggtatttggaggtcgtcttgtgagcaaattgcgatgctgcaattgt
ggtcacttttctgataagtatgagccgctgattgacctgagtttggagattgaagatgcg
gacacgcttcaaattgcactggagtcattcaccaatgtggagaaaattgaagattcagag
acaaagtttacgtgtgaaaactgcaaggaggaagtttctagggaaaagcagcttatgctg
gacaaggctccttcaattgctgctctgcatttgaagagattcaagattgatgggacctct
gttgagaagattggcaagcatgtggagtttcccttggagttggacttgaagccctacatc
aatgacaatgattccaatgatgtgggcttcaagtaccagctgtatgcggttgtggtgcat
aaaggatattcacttacttccggacattacgtttgctatataagatcctctccagacaca
tggcataagttggatgacccagaagtcagcaaggaaagggaagaatttgtgctatctcaa
gctgcctacattctgttctatgccagggagggtacaccctggtgttcgagtttgatcaaa
ccacaagagttttgcttggatcgtagcaactcaaatacatcacccaagtcagttctagat
aatgctaatagtgaatgcattagtgtagcagataaagatagtttggagaccagtgtaatt
aaggatgcagttgaggcaacttcaactcacattccgtgtgagagagagtttgaagagatt
gtatctagaggtgaaactgagggaatttcctttcagatttcctgtgccaacatggttgat
gtttctctgccacatggagtaagtgatggccacgatggagttttgcatgatgagatgtta
tgttttccacctgttgaagaagattacagcaatcagtgtgctgagaaaattggaagaaag
ggtgatcttcgtccctcagccccacccagatcacccacttcagatgtatattctggagaa
ctgccagaagccagacgttgtattccacgagaacatctgaaagtggagaaccatgtaaat
tgtaaaagatcatctaaaaagggcacaaaggattcgcagacagctgaagctcttagatgc
atcaagagaatgccaactgcaaggggcatgaaacttatggctgccttgcttcctaggaat
gacaagaccagaccaagatcatctccatgtaaaagggccagccctcctggttctcgccgt
aaacccattcgtgtggcagttattcgttga
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