Populus trichocarpa (black cottonwood): 18100152
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Entry
18100152 CDS
T01077
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
18100152
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18100152
04147 Exosome [BR:
pop04147
]
18100152
04090 CD molecules [BR:
pop04090
]
18100152
Enzymes [BR:
pop01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
18100152
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
18100152
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18100152
CD molecules [BR:
pop04090
]
Proteins
18100152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_15
AAA_21
nSTAND1
AAA_30
AAA_5
APS_kinase
DUF87
AAA_25
Rad17
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
18100152
NCBI-ProteinID:
XP_006381407
UniProt:
U5GAD2
LinkDB
All DBs
Position
6:9903627..9910457
Genome browser
AA seq
1357 aa
AA seq
DB search
MSQESLEIKTIEQWKWSEMQGLELVSEPPPDPSSHSHPFKTTPTRTLNTNSTYQQQESVV
ERREMESTEPKKDGTSSNSGGGGNGEKPGEVAVAGFGELFRFADGLDYVLMGIGSMGAFV
HGCSLPLFLRFFADLVNSFGSNANNMDKMMQEVLKYAFYFLIVGAAIWASSWAEISCWMW
TGERQSTRMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYM
ATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGAIHTTTLAKLSGKSQEALSQAGNIVEQT
IVQIRVVLAFVGESRALQAYSSALKISQRIGYKSGFSKGMGLGATYFVVFCCYALLLWYG
GYLVRHHYTNGGLAIATMFAVMIGGLGIGQAIPSMGAFAKAKVAAAKIFRIIDHKPAIDR
NSESGLELESVTGLVALKNIDFAYPSRPDARILNNFSLNVPAGKTIALVGSSGSGKSTVV
SLIERFYDPNSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADQ
VEIEEAARVANAHSFIIKLPDGFDTQVGERGLQLSGGQKQRVAIARAMLKNPAILLLDEA
TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEVGTHDELIA
KGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLS
DFSTSDFSLSLDAPFPNYRLEKLAFKEQASSFWRLAKMNSPEWVYALVGSIGSVICGSLS
AFFAYVLSAVLSVYYNPNHDYMSREIAKYCYLLIGLSSAALIFNTLQHSFWDIVGENLTK
RVREKMLTAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVA
CTAGFVLQWRLALVLIAVFPLVVAATVLQKMFMNGFSGDLEAAHSKATQLAGEAIANMRT
VAAFNSEAKIVGLFSTNLETPLRRCFWKGQIAGSGFGIAQFSLYASYALGLWYASWLVKH
GISNFSNTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDAT
PVPDRLRGEVELKHVDFSYPTRPDIPVFRDLNLRARAGKILALVGPSGCGKSSVIALIQR
FYEPSSGRVMIDGKDIRKYNLKSLRKHIAIVPQEPCLFGTTIYENIAYGNESATEAEIIE
AATLANAHKFVSALPDGYKTFVGERGVQLSGGQKQRIAIARALIRKAGLMLLDEATSALD
AESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDG
SYARMIQLQRFTHSEVIGMTSGSSSSTRPKDDDEREG
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagagtctctagagataaagacgattgaacaatggaaatggtcagaaatgcaa
ggccttgaactcgtgtccgagcctcctcctgatccctcctctcactcccatccctttaaa
accacaccaactcgaacattaaacacaaactccacataccaacagcaagaaagtgtagtt
gagagaagagaaatggaaagtacagagccaaagaaagatgggacttctagtaacagtggt
ggtggaggtaacggagagaagccgggtgaagtggctgtagctgggtttggagagctgttt
agatttgctgatgggttagattatgtgttgatgggaattgggtcaatgggtgcatttgta
catggatgttcgttacctctctttctccggttctttgccgatcttgttaactcttttggt
tctaatgccaataacatggataagatgatgcaagaagttttgaagtacgcattttacttt
cttattgttggtgctgcaatttgggcatcatcatgggcagaaatatcatgttggatgtgg
actggagagaggcaatcaacaaggatgaggatcaagtacctagaagcggcattaaaccag
gacattcaatacttcgacaccgaagttcggacatcagacgttgtttttgccatcaacact
gatgcagtgatggtccaagatgctatcagtgagaagttgggtaattttattcactacatg
gcaacatttgtttctggatttgtggtgggttttactgctgtgtggcaattagcactggtc
actctggcagtggttccactcatagctgtaattggagccatccacaccaccacattagcc
aagctctctggcaaaagccaagaagctttatcacaggctggaaacattgtagagcagacg
attgtccaaatccgggttgttttggcatttgttggggaatcaagagcattacaagcctac
tcgtcagctttgaagatttctcaaaggattggttacaagagtggattttcaaagggaatg
ggattaggtgcaacttactttgttgttttctgttgctatgctcttcttctctggtatgga
ggttatcttgttagacaccattataccaatggaggtctagccatagctaccatgtttgct
gttatgattggaggattaggtataggacaagctatccctagcatgggtgcatttgccaaa
gcaaaagttgcagctgcaaaaattttccgaataatcgatcataagccggctattgaccga
aacagtgaatctgggctggaattagaatcagttactgggcttgtagcgctcaaaaatata
gattttgcgtacccttcaaggccagatgctcgaattctgaacaatttttcgcttaatgtc
ccagctggaaagaccatagctttggttggcagcagtggctctggtaaaagcactgtagtc
tcgctcattgagagattctatgatcccaactcaggacaagtactgctagatgggcatgac
attaagacattaaagctgagatggctgagacaacaaatagggctagttagccaagagcct
gccttgtttgcaacaaccatcaaggaaaatatactattgggaaggcctgatgcagatcaa
gttgaaatagaagaagctgccagggttgcaaatgcccattcgttcattatcaagctaccc
gatggctttgacactcaggtgggtgagagaggactgcagctttctggaggacagaagcag
agagtagctatagcaagggctatgctgaaaaacccagcaattttgctcttagatgaggca
acgagtgctttagattccgagtcagaaaagctagtgcaagaagcccttgacaggtttatg
attggcaggactactcttgtcattgcccatcggctctccaccatacgcaaggctgacctt
gtagctgtactccagcagggtagtgttagtgaagtaggaacacatgatgagctcattgca
aaaggagaaaatggtgtgtatgccaagctcattagaatgcaggaggcagcacatgaaaca
gctctaaacaatgccagaaagagtagtgcaaggccttctagtgcaaggaactcagtaagc
tcaccaataattgcccgtaattcatcatatggccgatcaccatactcacgcaggctatct
gacttttctacctccgattttagtctctcccttgatgccccattccccaattaccgactc
gaaaaacttgctttcaaggagcaagctagttccttttggcgccttgcaaagatgaattct
cctgaatgggtctatgccttggttggttctattgggtctgttatttgtggttcccttagc
gccttttttgcatatgttctcagtgctgtacttagcgtctactataatccaaaccatgat
tatatgagcagagaaattgcaaaatactgctatttgctaatcgggctctcatcagctgca
ctgatattcaatacactacagcattccttctgggatattgtgggagaaaaccttacaaaa
cgagtgagggagaaaatgctgacagcagtgctaaaaaatgaaatggcatggtttgatcag
gaggaaaatgagagtgctaggattgcagcaagattggctcttgatgcaaacaatgtcaga
tcagccattggggacagaatttcagtgattgtacagaatacagcactcatgctagttgct
tgcactgcagggtttgttttgcagtggcgccttgcccttgttctcattgctgtcttccct
ttggttgttgcagccactgttctacagaaaatgttcatgaatggtttctcgggagaccta
gaagctgcccattccaaggccacacaactggcaggagaggccatagccaatatgaggact
gttgctgccttcaattctgaggcaaaaatagtgggtcttttctctaccaatctcgaaact
cctttacggagatgcttttggaagggacagattgcaggaagtggatttgggattgcacag
ttttctctttatgcttcttatgctctgggtctttggtatgcatcctggctagtgaagcat
ggaatctccaatttctcaaacacaatccgagtttttatggtcctcatggtctctgccaat
ggtgcagctgaaacattaaccttggctcctgacttcattaagggtggtcgagccatgcgc
tcagtctttgacctgcttgaccgcaaaactgaaattgaacctgatgatcctgatgccacc
cctgttcctgatcgtcttcgtggagaagttgagctaaagcatgtagacttttcttatccc
actcgccctgacattccagttttccgcgacctcaatcttcgtgcacgagctggcaaaatt
cttgcccttgtgggtcctagtggatgtggtaagagctctgtcattgctctcatacagaga
ttctatgagccatcatctgggcgggtgatgattgatgggaaggacattaggaaatacaat
ctcaagtccctgagaaagcacattgcaatagtcccccaggagccatgcctctttggtact
accatttatgaaaatattgcatacgggaatgagtcagcaacagaggctgaaataattgaa
gctgctactttggccaatgcccataagttcgtatctgcattaccagatgggtacaaaaca
tttgtaggggagaggggagttcagttatctggtggacagaagcagagaattgccattgct
cgagctttaataaggaaggccgggcttatgctactcgatgaggcaacaagtgcactagat
gctgagtctgagaggtctgtccaggaagccctggatcgtgcctgctcaggaaagaccaca
attgttgttgcacaccggctatcaaccataagaaatgctcatgtcattgctgtaattgat
gatggtaaagtagcagagcaaggatcccactcgcatctattgaaaaattatcctgatggg
agctatgcccgcatgatacagttacaaaggttcacacatagcgaagtcattggaatgacc
tcaggttcaagttcctcaaccagaccaaaagatgatgatgagagggaaggctag
DBGET
integrated database retrieval system
