Populus trichocarpa (black cottonwood): 18104268
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Entry
18104268 CDS
T01077
Name
(RefSeq) tRNA-specific adenosine deaminase TAD3 isoform X1
KO
K15442
tRNA-specific adenosine deaminase 3
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
18104268
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Deaminases
18104268
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GFIT
Motif
Pfam:
MafB19-deam
dCMP_cyt_deam_1
Motif
Other DBs
NCBI-GeneID:
18104268
NCBI-ProteinID:
XP_006376084
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Position
13:9751691..9763456
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AA seq
422 aa
AA seq
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MKNNMMGMWKIIHIPDKPPIPPNQQPTVNVLASVIDPKHANTLIRRLNQIAPFENLCHVK
RIRKKHLEGGKTQLSVILCLASEDNSLLNSLPQDVQELSNSYQLSPFVTKVCKYAATSKE
EWEEQCKLWPTSYHPPTYNIDGITGFSAEDSLSVFSFMKVAIELAKSGDGLIVNAAVIVD
PSVQQIITNGRDEIFSWHAPTNKTCIRNDCIEQSTTLISHQSNGAASLITEVLPNASPGE
PESLSYVVSCLNPWKWSEQRSDTANSCYWHPLRHAAVVAIESSADRDRRLFPGLGDAEEK
SFETSQSSYVGSPVKRQKTSVANVEKKEADPPDMPSNSVPERPYLCTGYDIYLVWEPCIM
CAMALVHQRIRRIFYAFPNPITGALGSVHRLQGEKSLNHHYAVFRICVPEEVLDIAGNSK
SC
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaacatgatgggcatgtggaaaatcatccacatccctgacaaaccaccgatc
cctcctaaccagcaacccactgtgaatgtgttggcatcagttattgatccaaagcatgct
aatacccttataaggcgattaaatcagatagctccttttgaaaatctatgccatgtcaag
cggattcgaaagaagcatcttgaaggaggaaaaactcagctttcagtaattttatgtctt
gcttctgaggataacagtctgttgaacagcttgccacaagatgtacaagagttgagcaat
tcctaccagttgagtccttttgttacaaaagtttgcaaatatgccgcgacatccaaagaa
gagtgggaagaacaatgcaagctatggccaacctcataccatccacctacctacaatatt
gatgggattactggattcagtgcagaggattcattgtcagttttcagcttcatgaaagtt
gctattgagttggcaaaatctggtgatggtttgattgtcaatgctgcagttatagtggat
ccttcagttcagcagatcattacaaatggacgtgatgaaatcttctcgtggcatgctccc
acgaacaagacttgcatcagaaatgactgcattgaacagtccacgacccttatttctcat
cagtctaatggagcagcaagtcttataacagaagtgcttccaaatgcttcgcctggtgaa
cctgaaagtttgtcttatgtggtgtcttgtttaaacccttggaagtggtctgaacagcga
tcagatacagctaattcttgttattggcatcctttacgacatgctgctgttgttgccatt
gaatcttctgctgacagggacagacgcctgttccctggtttaggagatgctgaagagaaa
tcctttgaaacttcacaatcatcttatgttggttccccagtgaaaagacaaaagacgagt
gttgcaaatgtcgagaagaaggaagcggatcctcctgacatgccttcaaattctgtacca
gagagaccttatctgtgcactggttatgacatctatcttgtgtgggagccatgtataatg
tgtgcaatggcacttgttcatcaaagaattagacgaatattttatgctttccccaatcca
attactggtgcattgggaagtgttcacagactacaaggagagaaaagcttaaaccatcat
tatgctgtattcagaatctgtgtgcctgaagaagttcttgatatagctggaaacagcaag
agctgctga
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