Populus trichocarpa (black cottonwood): 18110028
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Entry
18110028 CDS
T01077
Name
(RefSeq) ABC transporter B family member 11 isoform X6
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
18110028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18110028
04147 Exosome [BR:
pop04147
]
18110028
04090 CD molecules [BR:
pop04090
]
18110028
Enzymes [BR:
pop01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
18110028
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
18110028
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18110028
CD molecules [BR:
pop04090
]
Proteins
18110028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
Zeta_toxin
RsgA_GTPase
AAA_16
AAA_21
AAA_15
DUF87
AAA_30
DEAD
nSTAND1
AAA_24
AAA_7
SbcC_Walker_B
AAA_25
DLIC
Sigma54_activ_2
DUF2585
DUF4695
Motif
Other DBs
NCBI-GeneID:
18110028
NCBI-ProteinID:
XP_024441356
LinkDB
All DBs
Position
14:complement(7614896..7643732)
Genome browser
AA seq
1294 aa
AA seq
DB search
MAVENGRNGDKSMDEASTSKSLEVEEKSSGGRGDQQEPVKSKGDEETKTVPFLKLFSFAD
STDILLMILGTIGAVGNGASFPIMSILFGDLVNSFGQNQNNKDVVDSVTKVALNFVYLGI
GSAVAAFLQVACWMVTGERQAARIRGTYLKTILKQDVAFFDKETNTGEVVGRMSGDTVLI
QDAMGEKVGKFIQLVSTFIGGFIIAFVKGWLLTLVMLSSIPLLVIAGAGLAIIIARMASR
GQTAYAKAATVVEQAIGSIRTVASFTGEKQAISNYKKFLATAYSSGVQEGFTAGLGLGIV
MLLIFCSYALAIWFGGKMILEKGYNGGDVINVIVAVLTGSMSLGQASPCMSAFAAGQAAA
YKMFETINRKPEIDSSDTSGKILDDISGDVELRDVYFTYPARPDEQIFAGFSLFIPSGTT
TALVGQSGSGKSTVISLIERFYDPQAGEVLIDGTNLKEFQLKWIREKIGLVSQEPVLFAS
SIKDNIAYGKDGATTEEIRAATELANAAKFIDKLPQGIDTMVGEHGTQLSGGQKQRIAIA
RAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIY
RGKMVEKGSHSELLKDPEGAYSQLIRLQEVNKESKQETEDPKKSALSAESLRQSSQRISL
KRSISRGSSGVGHSSRNSLSVSFGLPTGFNVPDNPTSELEVSPQKQQTPDVPISRLAYLN
KPEVPVLIAGSIAAILNGVIFPIYGLLLSSVIKTFFEPPDELRKDSKFWALMFMTLGLAS
FVVYPTQTYLFSVAGCKLIQRIRSMCFEKVVHMEVGWFDEPEHSSGAIGARLSADAATVR
ALVGDSLSQLVQNIASAVAGLVIAFTASWQLALVILVLLPLIGLNGFVQIKFMKGFSADA
KKMYEEASQVANDAVGSIRTVASFCAEEKVMQLYRRKCEGPMRTGIRQGMISGTGFGVSF
FLLFSVYATTFYVGAQLVRHGKTNFADVFRVFFALTMAAIGISQSSSFAPDSSKAKGAAA
SIFAIIDRKSKIDPSDESGTTLDNVKGEIELRHISFKYPSRPDIEIFRDLSLAIHSGKTV
AVVGESGSGKSTVISLLQRFYDPDSGHITLDGIDIQSLQLKWLRQQMGLVSQEPVLFNET
IRANIAYGKEGNATEAEILAASELANAHKFISGLQQGYDTVVGERGTQLSGGQKQRVAIA
RAMVKSPKILLLDEATSALDAESERVVQDALDRVMVSRTTVVVAHRLSTIKNADVIAVVK
NGVIVEKGKHETLIHIKDGFYASLVALHMSASTS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgagaacggcagaaatggtgataagagtatggatgaggcgagcacatcaaaa
agcctggaggtggaggagaagagttctggtggaaggggggaccaacaagagccagtgaag
agtaaaggagatgaggaaactaaaaccgttccctttctcaagctcttttcatttgcggac
tctacagatattttgttgatgatccttgggacgattggtgctgttggaaatggagcatcc
tttccgattatgtcaatactgtttggtgatctggttaattcttttggacaaaaccagaat
aacaaggatgttgtggattcagttactaaggtggctctcaattttgtctacttgggaatt
ggttctgctgtagcagcatttcttcaggtggcttgctggatggtcacaggagagagacaa
gctgctcggataaggggtacatatttgaaaaccatactgaagcaagacgttgcctttttt
gacaaggaaacaaacactggagaggttgttggtagaatgtctggtgacactgttcttata
caagatgctatgggtgaaaaggttgggaaatttatacagctggtatcaacattcattgga
ggcttcatcattgcatttgttaaagggtggctgcttactcttgtcatgttatcctccatt
cccctgcttgtgattgctggtgcaggactggccatcataatagctaggatggcttctcgt
ggccaaactgcttacgctaaagcagctactgtagtagaacaggctattggttcaattaga
acagttgcatcatttaccggggagaagcaagccataagtaattacaagaagtttcttgct
actgcgtatagctctggtgttcaagaaggctttactgctggattaggtcttggcatcgtt
atgctacttattttctgcagctatgctttggcaatatggtttggtggaaagatgattttg
gaaaaaggatacaatgggggtgatgtgattaatgtgattgttgctgttttaaccggctct
atgtccctagggcaagcatctccctgcatgagtgcgtttgcagctggtcaagctgcagct
tacaagatgtttgagactataaatagaaagccagagatagattcttccgatacaagtgga
aagatattggatgacatcagtggagatgtagagttgagggatgtgtatttcacttatcca
gccagaccagatgagcagatatttgctggattctctctttttatccctagcggaacaact
accgcattggttggacaaagtggaagcggaaagtcaacggtgatcagtctgatagagaga
ttttatgatccacaagctggtgaagttctcatagatggcactaacctcaaagagtttcag
ctcaagtggattcgggagaaaattggtcttgtcagccaagaacctgtgttgtttgcatcc
agcattaaggataacattgcatatggaaaagatggtgcaactactgaagagataagagct
gcaactgaacttgccaatgctgctaaattcatcgataaactacctcagggaatagacacc
atggttggtgaacatggaactcagctgtctgggggacagaaacagagaattgccatagca
agagccattctgaaagatccacggattttacttttggatgaagctacaagcgcacttgat
gcagaatcagaaaggatagtacaggaggcattagaccggattatggtcaatcgaacaact
gtaattgttgcccaccgtttgagcactgtgagaaatgctgatatgattgcagttatttac
cgtgggaagatggttgagaaaggttcacattcggaactcctcaaggatcctgaaggagct
tattctcagcttatacgcttacaagaagttaacaaagagtccaaacaagaaacagaagac
cccaagaagtcagctctttctgcagagtccttaagacagtcaagtcaaagaatctcattg
aaacggtccataagccggggatcatctggtgtaggacatagcagtcgcaactcgttgtca
gtgtcatttggtttgcccactggattcaatgtccctgataatcccacatcggaattagaa
gtttctccacagaaacaacaaactccagatgtcccgatcagccggcttgcgtatctcaac
aagccagaggttccagtgctgattgctggatctatagctgcaattctcaatggggtcata
tttccgatttacggtctactactttccagcgtaattaaaacattttttgaaccacctgat
gaattgagaaaggattccaagttctgggcactaatgtttatgacgcttggcctggcatca
tttgtggtgtatccaacacaaacatacttattttcggttgccggttgcaaattaatccaa
aggatccgatctatgtgttttgagaaggtggttcacatggaggtcggttggttcgacgag
cctgagcactcaagcggagcaattggtgctaggctgtcagcagatgcagcaacagtgcgt
gctctggtcggagattctctttcccagttggttcagaacatcgcatcagctgttgcgggt
ttggtcattgcctttactgcatcctggcaattggcattggtaatccttgtactccttcct
ctaataggactcaatggatttgtacaaataaagttcatgaaaggattcagcgcagatgca
aagaaaatgtacgaggaagcaagtcaagttgcaaatgacgctgttggcagcataagaact
gttgcctctttctgtgctgaagagaaggtgatgcaattatacagaaggaaatgtgaaggc
cctatgaggactggaataaggcaagggatgatcagtggaacaggatttggagtttctttc
tttttactgttttctgtctacgcaaccactttctatgtgggagctcaacttgtccggcat
gggaaaacaaatttcgcggatgtttttcgagttttctttgctttaaccatggcagcaatt
ggaatttctcaatcaagctcctttgctcctgattcctcaaaagccaagggagcagctgct
tccatatttgctattatagaccgaaagtcgaagattgatccaagtgatgagtcgggaacg
acattagacaatgtgaaaggagaaattgaacttcgtcatataagcttcaagtatccaagc
aggccggacattgaaattttccgagacctgagcttggctattcattctggcaagactgtt
gccgtggttggagaaagtggaagtgggaaatcaacggtgatctcattattgcaaagattt
tatgatcccgattcaggtcatataactcttgatggaattgacattcagagtctccaactt
aagtggttgaggcagcagatggggcttgtgagccaagaacctgttctctttaatgaaaca
atccgtgccaacattgcatatggaaaggaagggaatgcaacggaagcagaaattctagct
gcatcggagctggccaatgcacacaagttcattagtggtttacaacagggttacgatact
gttgttggggagcgaggaacccagttgtcaggggggcagaaacaaagggtggctattgct
cgcgctatggtcaaaagtcccaaaatacttctattggatgaggctaccagtgcgctagat
gctgaatctgaaagagtggttcaagatgcactggacagagtaatggtgagtaggactaca
gtagttgtcgcccatcggttatctacaatcaagaatgcagacgttattgccgtggtgaaa
aatggagttattgtagagaaaggaaagcatgagactttgatccatatcaaagatggcttt
tatgcctccttagtagctcttcacatgagtgcctcaacttcttga
DBGET
integrated database retrieval system
