Populus trichocarpa (black cottonwood): 7453901
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Entry
7453901 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7453901 isoform X2
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
7453901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pop03400
]
7453901
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
7453901
DNA repair and recombination proteins [BR:
pop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
7453901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
DUF4692
SR-25
Motif
Other DBs
NCBI-GeneID:
7453901
NCBI-ProteinID:
XP_002302474
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All DBs
Position
2:complement(10089992..10093623)
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AA seq
334 aa
AA seq
DB search
MSGATKLQSATKQVHEPPRAILGPTGNRARVLEEARRKIEVLRKSQQKPKKPVEKMSQAA
VKNNLSVDSTCSSDSSSSSSGVSSSSGKNVKHYGIKKVEDVRNGREIKDVSSKKERPVKR
CDWITPNSDPLYMSFHDEEWGVPVYDDRKLFELLVYSQALAELSWPAILHMRDIFWKLFD
NFDPSSIAQFTEKKLLSLRFNGNLLLSEPKLRAVVENAKQMLKIQQEFGSFSNYCWRFVN
QKPLRNGFRYARQVPVKTPKAELISKDLMQRGFRCVGPTAVYSFMQVAGFVNDHLKACFR
YQECNVDVKKDFKPKSEETEMVTKALGNTCVSHD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggccactaagctacagtcagcgacaaaacaggtacacgagccgccgcgagca
atacttggtcccacaggaaacagagctagggttttggaggaggccagaaggaaaattgag
gtcttaaggaaatcacagcagaaaccaaagaaacctgtggagaaaatgtctcaagctgca
gttaagaataacttgtcagtggatagcacgtgctcttcggattcttcttcttcttccagt
ggcgtgtcttcaagttctggaaaaaatgtgaagcattacggaataaaaaaagtcgaggat
gttcgtaacggacgtgagattaaggatgtttcttcgaagaaagagaggccggttaagagg
tgtgattggatcactccgaattctgacccgctttatatgtctttccatgatgaagaatgg
ggagttccagtttatgatgacaggaaactgtttgagttacttgtatattcacaagcatta
gcagaactcagctggccagcaattcttcacatgagagacatattctggaagctgtttgac
aactttgacccatcatccattgcacaatttactgagaagaagcttctatcattgagattt
aatgggaatctgttgctatctgaaccaaagcttcgtgcagtagtggagaatgctaaacag
atgctcaagattcagcaggaatttggttccttcagcaactattgctggcgatttgtgaac
cagaagccattaagaaatggttttcgctatgcacgccaagtacctgtgaagacccctaaa
gctgaactgataagcaaggacctgatgcaaagaggcttccgctgtgttggacctacagct
gtttattcatttatgcaagtggcaggatttgttaatgatcatcttaaagcgtgcttccga
taccaagaatgcaatgtggacgtcaaaaaggatttcaaacccaagagcgaagagacagag
atggttactaaagctttggggaacacatgcgtatctcacgactga
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