Populus trichocarpa (black cottonwood): 7454691
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Entry
7454691 CDS
T01077
Name
(RefSeq) malate synthase, glyoxysomal
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00620
Pyruvate metabolism
pop00630
Glyoxylate and dicarboxylate metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
Module
pop_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
7454691
00630 Glyoxylate and dicarboxylate metabolism
7454691
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
7454691
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GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
HpcH_HpaI
Motif
Other DBs
NCBI-GeneID:
7454691
NCBI-ProteinID:
XP_024442175
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Position
15:complement(11495256..11497903)
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AA seq
568 aa
AA seq
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MGPATYENHYPPPNMKKFGYDAPEGVEIRGRYDGEFAVILTKDALQFVADLQREFRNRIK
YAMECRKEAKRRYSEGALPGFDPATRYIREGEWTCAPVPPAVADRKVEITGPVERKMIIN
ALNSGAKVFMADFEDALSPSWENLMRGQVNLKDAVAGTITFHDKVRNRVYKLNNQTAKLF
VRPRGWHLPEAHILIDGEPATGCLVDFGLYFYHNYAAFRRIQGAGFGPFFYLPKMENSRE
AKIWNCVFEKAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDYIF
SYVKTFQAHPDRLLPDRVQVGMTQHFMKSYSDLLIWTCHRRGVHAMGGMAAQIPIRDDPE
ANNEALELVRKDKLREVRAGHDGTWAAHPGLIPACMEVFSNNMGNTPNQIQSMKREDAST
ITEEDLLQRPRGSRSLEGLRLNTRVGIQYLAAWLTGTGSVPLYNLMEDAATAEISRVQNW
QWLKYGVELDGDGLGVKVNNDLFGKVVEEEMARIEREVGKEKFKRGMYKEACKIFARQCT
APTLDDFLTLNAYDNIVIHHPMGSSSRL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggacctgcaacttatgagaatcactatccaccgcccaatatgaagaagtttggctat
gatgctcctgaaggagttgaaattagaggcagatatgacggagagtttgcagtgatcctt
accaaggatgctttgcaatttgttgctgatttgcagagagagtttaggaaccgcatcaag
tatgcaatggagtgtcgcaaggaagccaaaaggaggtacagtgagggggctttaccaggg
tttgatccagctacaaggtacataagggagggggagtggacatgtgcacctgtccctcca
gctgttgctgataggaaggtggagattacaggtccagtggagaggaaaatgatcatcaat
gcactcaattctggagctaaagttttcatggctgactttgaagatgcactgtcaccaagt
tgggagaaccttatgagaggacaagttaacctgaaggacgctgtcgctgggactattacc
tttcacgacaaggtcaggaacagggtttataagctgaataaccagacagccaagttgttt
gtccgcccacgaggttggcatctacctgaggcgcacattctcattgatggagaaccagca
actggttgccttgtggactttggcctttacttttaccacaactatgcagcattccgtcgg
attcagggtgcagggttcgggcctttcttctatctccctaagatggagaattcaagggag
gctaagatatggaactgtgtgttcgagaaagcagagaagatggcaggaattgaaagggga
agcatcagggccactgtcctaatcgaaacacttccagctgttttccaaatgaatgaaatc
ctctacgaactaagggatcactctgttggcttgaactgcggaagatgggattacatcttc
agctatgtcaagacattccaggctcacccagatcgcctgctaccagacagggttcaagtt
ggcatgactcagcacttcatgaagagttactctgatctcctcatctggacatgccatagg
cgtggtgtccatgcgatgggcggcatggcagctcagattccaatcagagacgatccagag
gcgaataatgaagcactagaactcgtgcgaaaggacaagctaagagaggttcgagcagga
catgatggaacatgggcagcccaccctggacttatcccagcttgcatggaagtcttctca
aacaacatgggaaacacgccaaaccaaatccagtccatgaagcgcgaagatgcatcaacc
attacagaggaagacctcttacagaggccaagagggtcccgttcgttggaaggtctccgc
ctaaacacccgtgtaggaatccagtacttagcagcatggctaactggaactggctcagtc
cctctttacaacctcatggaagacgctgccactgcagaaatcagcagagttcagaactgg
caatggcttaaatatggagtggaacttgacggagatggccttggagtgaaagttaacaat
gatctgttcgggaaagtggtggaagaggaaatggctaggattgaaagggaagttgggaaa
gagaaattcaagaggggaatgtacaaggaggcctgcaagattttcgcaaggcaatgcaca
gcacctacactggatgattttcttaccctgaatgcttatgataatatcgtcatccatcac
cctatgggatcatcatcccgcctctaa
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