Populus trichocarpa (black cottonwood): 7459912
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Entry
7459912 CDS
T01077
Name
(RefSeq) putative disease resistance protein RGA4
Organism
pop
Populus trichocarpa (black cottonwood)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
Rx_N
LRR_4
LRR_8
AAA_22
AAA_16
AAA_14
nSTAND3
NACHT
Motif
Other DBs
NCBI-GeneID:
7459912
NCBI-ProteinID:
XP_052309735
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Position
6:complement(26465876..26496274)
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AA seq
1083 aa
AA seq
DB search
MAEGVLFNIAEEIIKTLGSLTAQEVALWWGIKDQLWKLNNTVTRIKAVIQDAEEQAQKQN
HQIEDWLMKLREAAYDAEDLLDDFSIQVLRKQLMSGKRVSREVRLFFSRSNQFVYGLRMG
HRVKALRERLDDIETDSKKFNFDVRGEERASLTTVREQTTSSEPEIIVGRESDKEAVKTF
LMNSNYEHNVSVISVVGMGGLGKTTLAQHVFNDEQVKAHFGARLWVSVSGSLDVRKIIKG
AVGRDSDDQLESLKNEFEEKIGKKKYLLVLDDVWDGEEGLDGEKWDRLKELLPRDAVGSK
IVVTTRSHVIANFTSTIAPHVLEGLSVGESWDLFRRKAFPQGQGSGHVDERIRKEIVKRC
CGVPLVIKAIARLMSLKDRAQWLPFIQQELPNRVQDDNIIHTLKLSYDPLPSFMKHCFAY
CSLFPKGRRIDVKSLIQFWIAQGFISSSCSGGGCLDIVGLRCFEHLLWRSFFHEVEKDRL
GNIKSCKMHDFMHDLATKVAGFQSIKVERGGNRICDLTRHVSFDTKLDLSQQIPIPLPYA
RSLRTVILFQGRKRGKGAWESICRDFRRLRVLVLSPSVIEEGSPLIQKLKHLKYLDLSNN
YEMEALPNSVTNLINLQVLKLNGCSKLKELPRGISKLINLRHLDVGCILDGDLCEDLEYM
PRGIGKLTSLQTLSCFVVAKKRSPKSEMIGGLDELRRLNELRGRLEIRVKGYEGGSCISE
FEGAKLIDKQYLQSLTIWRNPKLDSDSDIDLYDKMMQSLQPNSSLQEWRVEGYGGMSFPS
WVLDLSNLVRIRLESCRRLKHIPPLHGIPSLEELSIVGLDDLEYIDSEGVGGKGGSMFFP
SLKRLGILACPRVKGWWKRWSRDEMKDDSDESTIEEGLRMFCFPCLSSLSIEFCPNLTSM
PLFPTLDEGLDLRRTSSMPLQQTMEMTSPVSSSSSSSSFTRPLSKLKSLYVWSIDDMESL
PEVGLQNLSSLQSLSISRCSRLKSLPLPDKGMPSLQKLLIRHCRGLKSLSESESQGRIAH
LPSLQLLIIKDCSEELRGRTRGWGKESEEEWPNIKHILDIVIDRNYIQKEGRYVKGEGIL
IFP
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggtgtgctcttcaatattgcggaggaaataataaagacattaggttcccta
actgctcaggaggttgcactatggtgggggatcaaagatcaattgtggaagctcaataac
acagttactaggattaaggctgtgattcaagacgctgaggagcaggcacaaaaacagaac
catcaaatcgaagactggctcatgaagctgcgggaagctgcatatgatgcagaggatttg
ctggacgatttctcaatacaagttctgcggaaacagttgatgtccgggaaaagagtatcc
agggaggtacgcctttttttctcaagatcaaaccaatttgtgtatggtttacggatgggt
catagagttaaagcacttagagagagactagatgacattgaaactgacagtaaaaaattc
aactttgatgttcgtggtgaggagagagcttctttgaccactgtcagggagcaaaccacc
tcatctgaacctgaaataatagttgggagagagagtgacaaagaggcagttaaaactttt
ctgatgaattccaactatgaacataatgtttctgtcatctccgtagttggaatgggaggg
ttggggaagaccacactagctcaacatgttttcaatgatgagcaagttaaggcgcatttt
ggtgcgagactctgggtaagtgtctcaggcagcttagatgttagaaagattatcaaaggg
gctgtaggtagagattctgatgatcagttagagagtctgaaaaacgagttcgaagagaaa
ataggaaaaaagaagtatcttcttgtattagatgatgtgtgggatggtgaggaaggtctg
gatggtgaaaaatgggataggttgaaggagttgttaccacgtgatgcagtaggaagtaag
atagtggtaactacacgttctcatgtaattgcaaatttcacaagcacaatagcaccacat
gttttagaaggtctatctgtaggtgagtcatgggatctgtttagaagaaaggcatttcct
caagggcaagggtcgggtcatgtagatgagagaattagaaaagagattgtaaagaggtgt
tgtggagttcctttggtcataaaggcaattgcgaggttaatgtctttgaaagatagagcc
cagtggttgccctttatccaacaagaacttccaaatagggtccaagatgataacatcatt
cataccctaaagttaagctatgatcctctcccatcatttatgaagcattgttttgcttac
tgtagcttatttcccaaaggtcgtaggattgatgtgaaatcattgattcaattttggatt
gcacaagggttcattagctcttcatgttcaggtggtgggtgtcttgatattgttggtctt
aggtgctttgagcatttactgtggaggtcattctttcacgaagtggaaaaggatagactc
gggaacataaaaagttgcaaaatgcatgattttatgcatgatcttgcaaccaaagttgct
ggttttcagagcatcaaagtggagcgtggaggaaataggatttgtgatttgactcggcac
gtgtcatttgacacgaaattggatttgtcacaacaaattccaattcctttgccttatgca
agaagtctaagaacagttatattatttcaaggccgcaaacggggtaagggggcatgggag
tctatttgtcgagactttaggcgtttacgtgtgcttgttttgagtccttcggtaattgag
gaagggtcacctctcattcaaaagctaaagcatctgaaatatcttgatctttcgaataat
tatgagatggaggcgcttcctaattctgtcaccaatctgataaatttgcaagtgctcaag
ctcaatggttgcagtaagcttaaggaactaccaagaggtattagtaagctgatcaatctg
aggcatcttgatgttggttgcattcttgatggtgatttatgtgaggatttagagtatatg
cctcgtgggattgggaaattaactagtctacagacgttgtcatgttttgtggttgcaaaa
aaaaggagtcctaaatctgagatgataggtggattggatgagttgaggaggttaaatgaa
ttgagagggaggctagaaataagagtcaagggatatgagggtggttcttgtatatcagaa
tttgaaggagctaaattgatagataaacaatatcttcagtcgttgaccatatggcggaac
ccgaagctggatagtgactcagatattgatttgtatgataaaatgatgcaaagcctccag
ccaaactcaagtcttcaagagtggagagttgaaggctatggaggtatgagttttcctagt
tgggttttagatctctcaaatcttgtaaggattcgtctagaaagctgtagaagacttaag
catatccctcccttacatggaatcccttctcttgaagaattaagtattgtgggattggat
gatttggagtatatagatagtgagggggttggaggaaaaggagggtcgatgtttttccca
tctttaaagagacttggtatccttgcttgtcctagagtgaagggatggtggaagagatgg
agtagagatgagatgaaagatgatagtgatgagtcaacaatagaagaagggttgagaatg
ttctgttttccatgtctttcttccttgagcattgaattttgtccaaatctgacttcaatg
ccgttgtttccaactctcgatgaaggtcttgatttgcggaggactagttcaatgccatta
cagcagacaatggagatgacatcaccagtctcttcttcttcttcttcttcttcatttacc
cgtcctctctccaaattgaagagtctatatgtgtggtcaattgatgacatggaatctctt
ccggaagtagggctgcaaaatctctcttctcttcaatcgctatcgatttcgagatgctca
agattgaagtctctgccactgcctgataaggggatgccttctcttcagaaattacttatc
aggcattgcagaggattgaagtcgctatctgaatctgaatctcaagggaggatagctcac
cttccctctttgcaactgttaataatcaaggactgcagtgaagagctgaggggaagaaca
agaggatggggtaaggagagcgaggaggagtggcctaacattaaacacattctagatatt
gtaattgataggaattacattcaaaaggagggtcgctatgtaaagggtgaaggaatattg
atattcccttaa
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