Populus trichocarpa (black cottonwood): 7461242
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Entry
7461242 CDS
T01077
Name
(RefSeq) cysteine protease RD19A
KO
K01373
cathepsin F [EC:
3.4.22.41
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7461242
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7461242
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.41 cathepsin F
7461242
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C1: papain family
7461242
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Paralog
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GFIT
Motif
Pfam:
Peptidase_C1
Inhibitor_I29
Peptidase_C1_2
Motif
Other DBs
NCBI-GeneID:
7461242
NCBI-ProteinID:
XP_002305451
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All DBs
Position
4:18029956..18032194
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AA seq
368 aa
AA seq
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MSLNLSLLVILSLLFISAVHAETLNGDDPLIREVVDGQDASSSNLLSAEQHHFSLFKSKF
KKSYGSQEEHDYRFSVFKANLRRAARHQELDPTASHGVTQFSDLTPAEFRKQVLGLRRLR
LPKDANEAPILPTSDLPEDFDWRDKGAVGPIKNQGSCGSCWSFSATGALEGAHFLATGEL
VSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRDA
CKFDKNKVAARVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSRR
LDHGVLLVGYGSAGYSPVRMKEKPFWIIKNSWGEKWGENGFYKICRGRNVCGVDSMVSTV
AAVQTSSQ
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaatctctctctccttgtcatcctctctctcctgtttatctccgcagttcat
gcggagacactcaacggtgatgatcccttgatcagggaagtagtggacggtcaggatgcg
tcatcatcaaacctgttaagcgcagagcagcatcacttctcgctgttcaagagtaaattc
aagaaatcctacggctcacaggaagagcatgattaccggttctcggtattcaaggctaat
ctgagacgcgcggcgcgtcatcaggaattggacccaacggcgagtcatggagtgactcag
ttctccgatttgactccggcggagtttagaaagcaggttttagggttgcgcaggttgagg
ttgcctaaggatgcgaatgaagctccgattctacctactagtgatttgcctgaggatttt
gattggagagataaaggagctgttggtcctattaaaaatcagggttcatgtgggtcatgc
tggagttttagtgccacaggagctttggaaggtgcccactttcttgcaactggagagctt
gttagcctcagtgaacagcagcttgtggattgcgatcatgagtgtgatcctgaagaacca
ggttcatgtgactctggatgcaatggtgggttgatgaatagcgcctttgagtacactctc
aaagctggtggtcttatgcgcgaggaagactatccttacactggtactgatcgtgatgct
tgcaaatttgacaagaacaaggttgcagcaagagtggccaactttagtgttgtttccctt
gatgaggatcaaattgccgcaaatcttgtgaaaaacggacctcttgcagtggccatcaat
gctgtgttcatgcaaacatacattggaggagtgtcgtgcccgtatatctgctcaaggagg
ctggatcatggagtgttgctggtgggatatggttcagctggctattctcctgtcaggatg
aaggaaaagccattctggatcatcaagaactcctggggagaaaagtggggagagaatgga
ttctacaagatctgcaggggtcgcaatgtttgcggagtagactccatggtctcaactgtt
gctgccgtgcagaccagctcccagtag
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