Populus trichocarpa (black cottonwood): 7463008
Help
Entry
7463008 CDS
T01077
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03420
Nucleotide excision repair
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
7463008
09124 Replication and repair
03420 Nucleotide excision repair
7463008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7463008
03400 DNA repair and recombination proteins [BR:
pop03400
]
7463008
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7463008
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
7463008
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
7463008
TCR (transcription coupled repair) factors
Cul4-CSA complex
7463008
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7463008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
7463008
NCBI-ProteinID:
XP_002305340
UniProt:
B9H410
LinkDB
All DBs
Position
4:15391546..15403113
Genome browser
AA seq
813 aa
AA seq
DB search
MSLPTKRSATTSASTSTASTSASNSFLPMKKAKSQAASACSPLDHNKNGLYHSDDVVFDP
SSMSLDDDLKLVDYRTPPAAANLSRKKATPPQPAKKLVIKLVKAKPTLPTNFEEDTWAKL
QSAIKAIFLKQPALCDLEKLYQAVNDLCLHKMGGNLYLRIEKECETHISAALQSLVGQSP
DLVVFLKLVEECWHDLCDQMLMIRSIALYLDRTYVKQTPNARSLWDMGLQLFRKHLSLSP
EVEHKTVTGLLQMIERERLGETVNRKPLGHLLKMFTSLGIYAESFERPFLECTSEFYAAE
GMTYMQQSDVPDYLKHVESRLNEEQDRCKIYLDSSTKKPLIATAERQLLERHISAILDKG
FMMLMNGHRIEDLKRIYSLFLRVNALESLRQALSMYIRRTGQGIVMDEEKDKDMVSSLLE
FKACLDSIWEESFSKNEGFCITVKDAYEHLINLRQNHPAELIAKFLDEKLRAGNKGTSEE
ELEGTLEKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQF
TNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHE
LNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQ
KLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLLKLPKGRDVEDDDSFVFNEGFAAPLYR
IKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFP
IKPADLKKRIESLIDRDYLERDKSNPQIYNYLA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacgctcagccacaaccagcgccagcactagcacagccagcact
tccgcctcaaatagtttccttccaatgaagaaggccaagtcccaggccgcctccgcctgt
tctcctctcgaccacaacaaaaacggcctctatcactctgacgatgtcgtcttcgatcct
tcttccatgtctctcgacgacgatctcaagctcgtcgactaccgcactcctcccgccgct
gctaatttatctcgcaaaaaagccacccctccacaacccgctaaaaagctcgtaattaag
ctcgtcaaggctaaaccaactctgcctacaaattttgaggaggacacatgggcaaagctg
cagtcagctattaaggctatattcttgaaacaaccagctctttgtgacttggagaaactt
tatcaagctgtcaatgatctttgtctgcataagatggggggaaatctctatctgcgtatt
gaaaaagagtgtgaaacacatatatctgcagcattacaatccttagttggtcaaagcccg
gatttggtggtcttcttaaagcttgttgaggagtgctggcatgatctctgtgaccagatg
ttgatgattcgtagtatagccttgtatctggacagaacatatgtgaaacaaactccaaat
gcacgttcattgtgggacatgggtttgcagcttttccgaaaacatctttctttgtctcct
gaagttgagcacaaaactgtcaccggcctcttgcaaatgattgagagggaaagattaggt
gaaacagttaataggaaaccccttggccatcttttgaagatgttcacttcactaggaatt
tatgcagaaagttttgaaagaccattccttgagtgcacatctgaattttatgctgccgaa
ggcatgacatacatgcagcaatcagatgttccggattacttgaagcatgtggagtcgaga
ttgaatgaagaacaagatcgatgcaagatttaccttgattcaagcactaaaaagccacta
atagcaactgcagaaagacagctacttgaacgccatatatctgctattcttgataagggg
ttcatgatgcttatgaatggacatcggattgaggaccttaagaggatctactcacttttc
ttaagggtcaatgcccttgaatcattaaggcaggcccttagcatgtacatccgaagaacc
gggcagggcattgtcatggatgaagagaaagacaaagatatggtttcctccttgttagag
tttaaggcttgtcttgattcaatatgggaagaaagcttctccaagaatgaaggattttgc
atcaccgtaaaggatgcatacgagcatttaattaatcttcgtcagaaccatcctgctgag
ctgatagcaaaatttttggatgagaagcttcgtgctgggaataagggtacttccgaggag
gagttggagggtacacttgaaaaagttttggttttattcaggtttattcagggtaaggat
gtgtttgaagcattttataagaaggatcttgcaaaaagactgctgttgggaaaaagtgct
tctattgatgcagagaaatctatgatatctaagctgaagactgaatgtggcagccagttt
acaaacaagcttgaaggaatgtttaaggatattgaactgtcaaaggagataaacgagtcc
tttaaacaatcatctcaggccaggactaaacttccatcaggaattgaaatgagtgtacat
gtcttaactactgggtactggcccacatatccacccatggatgttaggcttcctcatgag
ctgaacgtttatcaggatatattcaaagaattctacttaagcaagtatagtggaagacgc
ttaatgtggcaaaattcattgggtcattgtgtgttgaaagctgagtttccgaaaggtaaa
aaggagctggcagtttctctatttcagactgttgttctgatgctgtttaatgatgcccaa
aagcttagttttcaagatatcaaagactctactggcatagaagacaaggaacttagaagg
actttgcagtctctggcgtgtggaaaagttcgtgtcctgctgaagctgcccaaagggagg
gatgtggaggatgatgattcctttgtgttcaatgaaggatttgctgctccactctatcga
ataaaggtaaatgcgatccagatgaaggaaactgtagaggagaacacaagcaccactgag
agagtatttcaggatcgtcaataccaggttgatgccgcgattgtccggataatgaagaca
aggaaggtgctaagtcacacacttcttataactgaactattccagcagctgaagtttcct
ataaagccagctgatttgaagaaaaggatagaaagccttatcgacagggattaccttgag
cgagacaagagcaatcctcagatatacaattacttggcctaa
DBGET
integrated database retrieval system