Populus trichocarpa (black cottonwood): 7464838
Help
Entry
7464838 CDS
T01077
Name
(RefSeq) ent-copalyl diphosphate synthase 1 isoform X1
KO
K04120
ent-copalyl diphosphate synthase [EC:
5.5.1.13
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00904
Diterpenoid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00927
Gibberellin A12 biosynthesis, GAPP => GA12
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
7464838
Enzymes [BR:
pop01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.13 ent-copalyl diphosphate synthase
7464838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth
Terpene_synth_C
Vitellogenin_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
7464838
NCBI-ProteinID:
XP_024456855
LinkDB
All DBs
Position
5:21460534..21467588
Genome browser
AA seq
822 aa
AA seq
DB search
MSSHYSSIHLLSTVPSTPRSSFSTSNNIHPLPFPAGVWLYGAKDKKDNIHTRCSAISKPR
TQEYADLFQQQNGLPLINWPHDIVEDDAEEDAAKVSVAKEISKRVRTIKAMLDMMEDGEI
SISAYDTAWVALVEDINGSGLPQFPSSLQWIANNQLPDGSWGDAGIFLAHDRLINTLACV
VALKSWNLHQDKCEKGMLFFRDNLCKLEDENAEHMPIGFEVAFPSLLAIAKELDIEVPDD
STFLQEIYARRNLKLKRISKDIMHNVPTTLLHSLEGMRGLDWKQLIKLQCLDGSFLFSPS
STAFALSQTKDKNCLEYLNKAVQRFKGGVPNVYPVDLFEHIWVVDRLQRLGVSRYFVSEI
NECVDYIHRYWTENGICWARNSNVHDIDDTAMGFRILRLHGHQVSADVFKHFEKGGEFFC
FAGQSTGAVTGMFNLYRASQVLFPGEKILEDAKEYSFEFLREKQAANELLDKWIITKDLP
GEVGFALEIPWYASLPRVETRFFIEQYGGEDDVWIGKTLYRMSYINNSEYLQLAKLDYNN
CQALHRIEWENFQKWYEECNLRDFGISRRTLIFSYFLAAASIFEPERSKERLAWATTTVL
LDIVGSYFPENYNNSSEQRRAFIHEFSYGISINGRRSGRKKTRQELVKLLLGTLNQLSLG
ALVVHGRDISHSLRHAWEKWLLIWELEGDRRQGEAELLVQTINLTAGYLVSEELLAHHPQ
YEQLVDLTNRICYQLDHYKKNKVHYNGSYSTITSNTDRITTPQIESDMQELVQLVVQNPS
DGIDSNIKQTFLQVAKSFYYSAICDPGTINYHIAKVLFERVP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcattactcctccatccatctcttgtctacggtaccaagcacaccaagatct
tccttttcaacctctaataatatccatccccttcctttccctgcaggtgtttggttgtat
ggggctaaagacaaaaaagataacattcatacaaggtgcagtgctatatccaagcctcgc
actcaagaatatgcagatttgtttcaacaacaaaatggtctgccattgataaactggcct
cacgatattgtggaggatgacgcagaagaagatgctgctaaggtctctgtagcaaaggaa
ataagcaagcgcgtcagaactattaaagcaatgctggatatgatggaggatggagagata
agcatctcagcttatgacaccgcatgggttgctcttgtggaagatattaatgggagtggc
cttccccaattcccatctagccttcagtggattgccaacaatcagcttccagatggttcg
tggggtgacgctggaatatttttggcgcatgataggttgattaatacgctagcttgcgtg
gtagcattgaaatcttggaacttgcatcaagataaatgcgaaaaagggatgttatttttt
agagacaacttatgcaagcttgaagatgaaaatgctgagcacatgcctattggatttgaa
gttgctttcccttcacttcttgcgatagccaaagaattagacatcgaagttccggatgat
tctactttccttcaagagatttatgccaggagaaatttaaagctgaaaaggatttccaag
gacataatgcacaatgtgcccacgaccctactccatagcttggaaggaatgcgaggtctg
gactggaaacagcttataaaattgcagtgcctagatgggtcattcttattctctccatcc
tctactgccttcgcactcagtcaaactaaagataaaaactgcttggaatatttgaataag
gcggtccaaagattcaaagggggagttcccaatgtctacccggttgacttatttgagcac
atctgggttgtggatcgcctgcagcgtcttggagtctcaagatatttcgtctcagagatc
aatgaatgtgtcgattatattcatagatattggactgaaaatggcatctgttgggcgaga
aattctaatgtccatgatattgatgacacggccatgggattcaggatacttagattacat
gggcaccaggtttctgccgatgtgttcaagcattttgagaaaggcggtgaatttttctgc
ttcgcagggcagtcaacaggtgctgttacgggaatgttcaacctgtatagggcttctcag
gttctgtttccgggagagaagatacttgaggatgccaaggaatattcattcgaattccta
agggaaaaacaagctgctaatgaacttctagataaatggattataacgaaggacttgccc
ggagaggtgggttttgcattggagattccatggtatgcgagcttgcctcgagtggagact
agattcttcatagaacagtatggtggcgaggacgacgtgtggattggcaagaccctttac
agaatgtcatatataaacaacagtgagtatctccagctggcaaaattagactacaacaac
tgccaagcattacatcgcattgaatgggaaaattttcaaaagtggtatgaagaatgtaat
ctaagagatttcgggataagcagaagaacccttatcttttcttactttttggcagcagcc
agtatctttgagccggaaaggtccaaagagcgacttgcatgggctaccactacagtcttg
ctcgacattgtcggctcttatttccctgagaattataacaattctagcgagcagaggaga
gccttcatacatgaattcagttacggtattagcataaatggaaggaggtcgggtagaaag
aagacaaggcaggagctcgttaagctgctgcttggaaccctaaatcagctctctttgggc
gcattagtggttcatggtcgagacattagccacagtttacgccatgcttgggaaaagtgg
ctcttgatctgggaattggaaggagatagacgccaaggggaagcagaactactagtgcaa
acaataaatctcaccgccggctatttggtctccgaggagctcttggcccatcatcctcag
tatgaacaactcgtcgacctgacaaacagaatatgctatcaacttgatcattacaagaaa
aacaaggtacattacaatggaagctacagcactattaccagtaatactgacagaattaca
accccacaaatagaatcagacatgcaagaacttgtgcagttagtagtccaaaatccctca
gatggaatagattctaatatcaagcaaacgttccttcaagtagccaagagtttttattat
tctgcaatctgtgatcctgggactatcaactatcacatagctaaagtgctctttgagaga
gtgccttga
DBGET
integrated database retrieval system
