Populus trichocarpa (black cottonwood): 7466284
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Entry
7466284 CDS
T01077
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 41
KO
K19466
ATP-dependent RNA helicase DDX59 [EC:
5.6.2.7
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
7466284
Enzymes [BR:
pop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
7466284
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Motif
Pfam:
DEAD
Helicase_C
zf-HIT
ResIII
CMS1
Toprim_C_rpt
Motif
Other DBs
NCBI-GeneID:
7466284
NCBI-ProteinID:
XP_002320399
UniProt:
B9IA30
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Position
14:9515636..9518575
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AA seq
524 aa
AA seq
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MSTPLVDGLTVSEAAGDDVKKTSRDQREALPGEPICVVCGRYGEYICDQTDSDICSLECK
QTLLGRAADTHLPVGHPLPKRLAATDECFYVRDSESPLTSDQTELLRRKLEIHVKGDSVP
DPILSFSSCNLPEKLLHNIQTLGYDMPTPIQMQGIAAALTGKSLLASADTGSGKTASFLV
PVVSRCATFRHGNISKSKKPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVIGGDAMP
RQLYRIQQGVELIVGTPGRLIDLLAKHDIELDDIMILVLDEVDCMLQQGFRDQVMQIFRA
LSQPQVLMYSATMSQEVEKMASSMAKDLIFVSIGQPNRPSKAVKQLAIWVESKQKKQKLF
DILMSKQHFLPPSIVYVGSRIGADLLSNAITVTTGLKALSIHGEKSMKERREIMKSFLVG
EVPLVVATGVLGRGVDLLGVRQVIVFDMPNCIKEYVHQIGRASRMGEDGTSIVFVNEENR
NLFPDLVEVLKSSGAVIPRELVNSRYVKRSFPMGKGQRKRKYGS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaccacttgttgatggactcactgtgtctgaggctgcgggagatgatgtgaaa
aagacctctagagaccagagagaagcgctgcctggggagcctatatgtgttgtttgtggt
cgctatggtgagtatatatgtgatcagactgattctgatatttgcagcttggaatgcaaa
caaactctcttagggagggctgctgacacccaccttccagttggccacccacttcctaaa
cgactggctgcaactgatgagtgcttttatgttagagactcagaatctcctttaactagc
gatcaaacagaactgctgaggaggaaactggaaatccatgtgaagggagactcagttcca
gatcccattttgtctttctcttcttgtaatcttcctgagaaactcctgcacaacatacag
actttaggatatgacatgccgacacctatacagatgcaaggtattgcggctgctttgacc
ggaaaaagtctgcttgcttcagctgacactggctcagggaaaactgcatcctttctggtt
cctgttgtttctcgttgtgcgacttttaggcatgggaatatatctaaaagtaaaaagcca
ctagcgatggttttaactccaaccagggagctttgtatacaggttgaggaacaggctaaa
ttgctaggaaagggtttgccttttaaaactgcccttgtgattggcggtgatgccatgcct
agacaactgtaccgcattcagcagggtgtggaactcattgtgggaactcctggtaggctt
attgatctcttagcaaagcacgatattgaactagatgacataatgatattggtcctggat
gaggtggactgcatgcttcaacagggcttccgagatcaggttatgcagattttcagggct
ctctcacaaccccaagtgttgatgtattcggctacaatgtcacaagaggtagagaagatg
gcaagctctatggcaaaagatttaatttttgtttccattggccagcctaacagaccaagt
aaggccgtgaagcagctggctatctgggtggagtcaaaacaaaagaagcaaaagcttttt
gacatattgatgagcaagcagcattttctaccaccatcaattgtatatgtgggttcccga
attggggcagatctcctatctaatgcaatcacagtcaccactggattgaaggccctatca
attcatggagagaagtctatgaaggagagacgagagataatgaagtcatttttggttgga
gaggttcctctggttgtggctactggggttttgggtcggggagttgatctcttgggcgtg
agacaggtaatagtgtttgatatgcccaattgcattaaggagtatgtccatcagattggg
agggcatcgcgaatgggagaggatggtacatctattgtatttgttaatgaggagaacagg
aatttatttccagatttggttgaagtcttaaaatcttccggagctgtgatccctcgtgag
cttgttaattcaaggtatgtgaagcgttcttttcctatgggcaagggccagagaaagcga
aagtatggttcatga
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