Populus trichocarpa (black cottonwood): 7469943
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Entry
7469943 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7469943 isoform X2
KO
K20305
trafficking protein particle complex subunit 8
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7469943
Membrane trafficking [BR:
pop04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
7469943
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
DUF974
Motif
Other DBs
NCBI-GeneID:
7469943
NCBI-ProteinID:
XP_002323381
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Position
16:complement(4892237..4904003)
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AA seq
1280 aa
AA seq
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MDPAKTSLGKMLLEEITPVVMVLRTPLVEESCLKNSLSFIEMLSPFCDFNNIDVPVRTSS
DQPYRLQKFKLRLFYESDIKQPDIVAKERLKQVITEAGEKDRSDLSTDPLDISNVLASSK
SEISPSWFEIFNKELVRTVSFSEHEAFDHPVACVSVVSSKDEQPINKFVDLFNTNKLPSL
LNDGAMDPKILKHYVLVHDNKDGPSEKATKILTEMKNTFGFNGCHLLCINSSQDEQIEHQ
DNPWVPYKFDSSPSQDLGCYLNIDDFNEIKDLIQELSSKHIIPYMEQKVRVLNQQISATR
KGFKNQIKNLWWRKGKEDTPDSSNGPMYTYSSVESQIRVLGDYAFMLGDYELALSNYRLI
STDYKIDKAWKRYAGVQEMMGLTYFMLDQSRKEADNCMENAFNTYLKLGSSGRQNATRCG
LWWIEMLKMKDQFKEAATVYFRICSEELLHSAVMLEQASYCYLLSQPPMLHKYGFHLVLS
GDRYKKCDQIKHAIRTYRNAVSVYKGTPWSYIKDHVHFHIGQCYGFLGMYDVAFTHMLEV
LACSHQSKATQELFLREFLQIVQKAGKTFEVLRLQLPVINISSLKVDFEDHRTYALPGST
SVKESVWRSLEEDMIPSLPTVRTNWLELQSKLLPKYKESNICVAGEAIKIAIEFKNPLEI
PISISSVSLICELSATSDETNSDASCSTAGIWNNEEHENLREIISDTSSFSLSEVNISLG
GGEANLVQLTVTPKVEGILKIVGVRWKLSGSVVGFYSFGSNYVKKKIAKGRRKAKQSPGN
YLKFIVIQSLPKLEGFIHALPEKAYAGHLQNLVLELRNRSEVSVKNLKMKTSHPRFLNIG
KQEDLDLEFPACLEKKTNVSPPANPKIASHGVFLFPEDLSVQGENPLLWPLWFRAAVPGN
ISLQVVIYYEMGDQSSAMRYRILRMHYNLQVLPSLDVSFKISPYPSRLQEFLVHMDVVNK
TNSESIQVNQLSTIGSHWEISLLQPIDTIFPSQSLIAGQAFSCFFVLKSCRKSLSTEEST
SSLFPHIGSNVSLVPDGSKGAPFDTSKSPLAGFHDYERLQHGISNQEAENAVDFILISRP
LKSNSQPGVADAHHVFSHHACHCSTASTSPISWVVDGPRTRHHDFSSSFCEINFRMTIYN
SSNALASIILKTLDSTSISDQLSDEASGNQVGWHDVSLAKDSKIESDALRNHVRKSLLPE
SVSPFIWSGSSSTGVQIKPLSTTEIPLQICVFSPGTYDLSNYVLNWNLIPVNDHESVGER
IQSSGTSLGYPYYLTVLPSD
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggatccggcgaagacttcacttggtaaaatgctattggaggagatcactccggtggtc
atggtcctccgtacacccctggtagaagaatcttgcctcaaaaacagcctctccttcatc
gaaatgcttagtcccttttgcgacttcaataacatcgacgtgcctgtacggacttcgagt
gatcagccatacaggctacagaagttcaaattgagattattttatgagtctgatattaag
cagccggatatcgtagcgaaggagcgattaaagcaggttattactgaggcaggagagaag
gatagatcggatttgtccactgatcctctagatattagcaatgtacttgcaagctccaaa
tctgaaatttcaccatcttggtttgagattttcaataaagagcttgtacgtactgtctct
ttttccgagcacgaggcttttgaccaccctgtggcatgtgtttcagttgtttcttcaaag
gatgaacagcctatcaacaaatttgtggaccttttcaacactaacaagttgccttccctt
ctcaatgacggtgcaatggacccaaagattttgaaacattatgtattggtgcatgataat
aaagatggtccctcagagaaggcaactaaaatactaacagagatgaaaaatacgtttggc
tttaatggctgtcatttactttgcattaattcttctcaagatgagcagatagaacatcaa
gataatccttgggttccttataaatttgattcttcacctagtcaggatcttggttgttat
cttaacattgatgattttaatgagataaaggatttaatacaagaattatcatctaaacat
atcattccttacatggagcagaaagttcgtgtgctcaatcagcagatttctgctacaagg
aaaggctttaaaaaccaaattaaaaacttatggtggagaaaagggaaagaagacacacca
gattcctccaatggacctatgtatacctatagctccgtcgagtctcagatcagagttttg
ggtgactatgcattcatgttaggagattatgaactggcattatcaaactatcgccttatt
tccacagattataagattgataaagcttggaagcgctatgctggtgtgcaggaaatgatg
gggcttacgtactttatgttggatcaatcaagaaaagaagcagataattgcatggaaaat
gcttttaacacttatttaaaacttgggtcttctggtcgacaaaatgctacacgctgtggt
ctttggtggatagaaatgttgaagatgaaagatcaatttaaagaggctgccactgtttac
tttcgcatttgcagtgaggaactgttacattcagctgtcatgcttgagcaagcatcttat
tgctacttgttgtcccaaccacctatgttgcacaagtatgggtttcatcttgttctttct
ggtgatcggtataaaaaatgtgaccagattaaacatgcaattcgtacatatagaaacgct
gtctcagtatataagggaaccccatggagctacatcaaagatcatgttcatttccatatc
ggccagtgttatggttttcttgggatgtatgatgttgctttcacacatatgttggaagtc
ctggcctgtagccatcagtccaaggcaacacaggagttattcctcagagaatttcttcaa
attgttcagaaagcagggaaaacatttgaggtattaagacttcagttgcctgttatcaac
atctcatcgcttaaggttgattttgaagaccatcgaacctatgcattgcctggatcaact
agtgttaaagaaagtgtctggcgttcattggaggaagacatgatcccgtcattgcctact
gtcaggactaattggctggaactacaatcaaagcttttaccgaaatataaagaatcaaac
atctgtgtggctggagaagcaataaagatcgctattgaatttaagaaccccctggaaatc
cctatttcaatctctagtgtttctttgatatgcgagctttctgcaacatcagatgaaacg
aattctgatgcaagttgctcaactgctggaatctggaataatgaagaacatgaaaacttg
agagagataatatcagacacttcctcattttccttgtccgaggtcaacatctcactggga
gggggtgaagccaatttggtgcaactaacagttactcccaaagtagaaggcattctaaaa
attgttggtgtcagatggaaattgtcaggttctgtggttggtttttatagttttgggtct
aattatgtgaaaaagaaaattgcaaagggaagaaggaaagctaagcaatcacccggcaat
tacttgaagtttatagtgatccagagtctacccaagcttgagggcttcattcatgctcta
cctgagaaggcatatgcaggacatttacagaatcttgttttagagttgaggaaccgatca
gaagtttctgtaaagaatttgaaaatgaagaccagccatcctagattcctaaatattggg
aaacaagaagatttggatttagaatttcctgcatgcttagagaagaaaacaaatgttagc
ccacctgctaatccaaaaatagcatctcatggtgtttttctatttccagaggatctctca
gtgcaaggggaaaatccactattgtggcctctttggtttcgggctgctgttcctggaaac
atctccttgcaagtagtaatatactatgagatgggagatcaatcaagtgccatgagatac
cgaattctacgcatgcattataatttgcaggtactaccatcattggatgtgtcatttaaa
atcagtccctatccgtcaagattgcaagagttccttgtgcacatggatgttgtcaacaaa
actaactcagagagcatccaggttaatcagctatcaaccattggaagccactgggaaatt
tctctgcttcaacccatcgatacaatcttcccttcacaatctctaattgctggccaagca
ttttcatgtttctttgtgctcaagagttgtaggaaatcattaagtactgaagaaagtacc
tcatctcttttccctcacattggaagcaatgtaagtttggttcctgatggtagcaaagga
gctccttttgatacatccaaatcacctttggctggtttccacgattatgaaaggttgcag
catggaatttctaatcaggaagctgaaaatgcagtggactttattttgatctctcggcca
ctaaaaagcaattctcagcctggagttgcagacgcacatcatgtcttttctcatcatgca
tgtcattgcagcactgcgagcacaagtccaatatcatgggtagttgatggacctcgaacc
agacatcacgacttttcttcttcattttgcgaaataaattttaggatgactatctacaac
tcatcgaatgctcttgcatctataatcttaaagacccttgattccaccagcattagtgat
cagctgagtgatgaagcttctggaaaccaagttgggtggcatgatgtgtctctagcgaag
gacagtaaaatcgaatctgatgcactcagaaaccatgttcgaaagtcactattaccagaa
agtgtctctccattcatctggtctgggtcaagctcaaccggagtccaaatcaagccgcta
tccacaactgaaattcctcttcaaatatgcgtgttctcccctggtacatatgatttgtca
aactatgttttgaattggaatcttataccagttaacgatcatgaaagtgtaggagagaga
atacagtcttcagggacaagcctgggatatccctactaccttactgttctcccatcagat
tga
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