Populus trichocarpa (black cottonwood): 7470390
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Entry
7470390 CDS
T01077
Name
(RefSeq) endo-1,4-beta-xylanase 5 isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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GFIT
Motif
Pfam:
Glyco_hydro_10
CBM_4_9
SpoIISB_antitox
Motif
Other DBs
NCBI-GeneID:
7470390
NCBI-ProteinID:
XP_024454885
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Position
4:complement(18846278..18849380)
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AA seq
563 aa
AA seq
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MQSMAFLSKKSMHKAPILGFSVFLIPFLAFSYDGPLYDFTAYTECKSVPEKPLYNGGIFK
DQAPLTQHRISTSSDGSYTPALILQNLAQNTMYCFSIWVKIQGADSTLVTASLMANNNST
YDCVGTVLAKSGCWSFLKGGFILDSPSSVSILYFQGTTDKSINVAIASASVQPFTEQQWR
TNQQYIINTERKRAVTIHVSDSHGDRLQGASITIEQISKDFPFGSAIARTILGNLPYQNW
FVERFNAAVFENELKWYATEPEQGKVNYTIPDQMLEFVLANQIVARGHNIFWEDPKYNPA
WVRDLTGPDLKSAVNFRIQSLMSKYKEEFIHWDVSNEMLHFDFYEERLGPDATLHFYKTA
HEADPLASLFLNEFNVVETCTDVSTTVDTYIDKIRELERGGSSMNGIGLESHFSKPNLPL
MRAILDKLATLKLPIWLTEVDISNKFDKETQAIYLEQVLREGFSHPAVDGIMLWTAIHPN
GGCYQMCLTDYNLQNLPAGDTVDKLLREWETGEGNGRTDDHGSYSFFGFLGEYKIMVQYG
NRTTNSTLSLSQSDETKHFNIQL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccatggcttttctaagcaagaagagcatgcacaaggctcctatcttgggcttc
tcagttttcttgatccccttcttggctttttcttacgatggacctttgtatgacttcaca
gcctacaccgagtgtaaatcagtgccagagaagccactatataatggagggatattcaaa
gatcaagcaccacttacccagcacagaattagtacttcttcagatggctcttatacacca
gctttgatattgcaaaatctagctcaaaacaccatgtattgtttttccatttgggtcaag
atacagggtgcagattcaactctagtaactgcaagcctaatggcaaataataattccaca
tatgattgcgtggggactgttttggccaagagtggatgctggtcgtttctcaagggagga
ttcattcttgattcaccttcaagtgtatcaatactatattttcagggcacaactgacaaa
agtatcaatgtcgcaattgcaagtgcttcagtacagccatttactgagcagcaatggaga
acaaatcagcaatacataattaacactgaaagaaagcgtgccgtgacaatacatgtgtca
gatagtcatggagataggctgcaaggagcatccattacaatagagcaaatctcaaaagat
ttcccatttggatcagcaatagcaagaacaattcttggaaatttaccctatcagaattgg
tttgttgagagattcaatgcagcagtatttgaaaatgaactcaagtggtatgcgacagaa
cccgaacaagggaaggtcaattacaccataccagatcaaatgttggaattcgttctagcc
aaccaaatagttgctagaggccacaatattttctgggaagaccccaagtacaatccagct
tgggttcgtgatctcacaggtcctgacctaaaatcagcagtcaacttccggattcaaagc
ctaatgagcaaatacaaagaagagtttatacattgggatgttagcaatgaaatgctacat
tttgatttctatgaagaaaggcttggtccggatgccactttacatttctacaagacagca
cacgaagcagaccccttagcatcattgtttttgaatgaatttaatgtggtggagacttgc
actgatgtgagtacaacagtagatacctacattgataagataagagaacttgaacgcgga
ggatcatcaatgaatggaattggcctagagagtcacttttctaagccaaatcttcctcta
atgagggctattctagataaattggctacccttaagcttcccatttggctcacagaagtt
gatatcagcaataaatttgataaagaaactcaggctatttatctagagcaggtgttaaga
gaaggcttctcgcatcctgcagtggatgggatcatgctttggactgcaatccatcctaat
ggggggtgctaccaaatgtgccttacagattataatcttcaaaacctcccggccggtgat
acagttgacaagctcctaagagaatgggaaaccggggaaggaaatggccgcacagatgat
catggatcatacagcttctttggcttcttaggtgaatacaaaataatggtgcaatatggc
aacagaactacaaattcaacactgtcactcagtcaaagtgatgaaacgaagcattttaac
attcagttgtga
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