Populus trichocarpa (black cottonwood): 7471841
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Entry
7471841 CDS
T01077
Name
(RefSeq) eukaryotic translation initiation factor 4E-2
KO
K03259
translation initiation factor 4E
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7471841
03012 Translation factors [BR:
pop03012
]
7471841
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
7471841
mRNA cycle factors
Common to processing body (P body) and stress granule
7471841
Translation factors [BR:
pop03012
]
Eukaryotic type
Initiation factors
eIF-4
7471841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF4E
Motif
Other DBs
NCBI-GeneID:
7471841
NCBI-ProteinID:
XP_002316746
UniProt:
B9I127
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All DBs
Position
11:complement(8257370..8260426)
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AA seq
223 aa
AA seq
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MDVEDPQKLATEKTPNPNTEDDLEEGEIVAGGDDDSSLKKSVSLPYQPHPLEHQWTFWFD
NPSAKSKQASWGSSLRSIFTFSTIEEFWSVYNNIHHPSKLAVGADFHCFKDKIEPKWEDP
ICANGGKWSVTLSKGKSDTFWLNTLLALIGEQFDHGDEICGAVVSVRARQEKIAIWTKNA
SNETAQVSIGKQWKEFLDYNETIGFIFHDDAKKDRNAKNRYSV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgaagacccacaaaaattagcaacagaaaaaactccaaaccctaacaccgaa
gacgatctagaagaaggagagatcgttgcaggaggagatgacgactcatcgttaaagaaa
tcagtttctttaccataccagcctcacccacttgaacatcaatggactttctggttcgat
aatccatctgccaaatccaaacaagccagttggggtagcagcctgcgctccatcttcact
ttttctactattgaggagttttggagtgtttacaacaatatacatcacccgagcaagctg
gctgttggagcagactttcattgcttcaaagataaaattgagccaaaatgggaggaccct
atttgtgctaatggagggaagtggagtgtaactcttagtaaaggaaaatctgatactttt
tggttgaatacgttgttggcattgattggagagcagtttgatcatggagatgaaatttgt
ggagcagtggtcagtgtgagggctaggcaggaaaagattgctatctggactaagaatgct
tcaaatgaaactgctcaggtgagcattggaaaacagtggaaggagtttctcgattacaat
gagactattgggttcatattccatgatgatgcgaagaaagacagaaatgccaagaatcgc
tactcagtatga
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