KEGG   Populus trichocarpa (black cottonwood): 7473227
Entry
7473227           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7473227 isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    7473227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pop03400]
    7473227
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     7473227
SSDB
Motif
Pfam: HD HD_assoc_2
Other DBs
NCBI-GeneID: 7473227
NCBI-ProteinID: XP_024462067
LinkDB
Position
8:13364899..13370885
AA seq 468 aa
MGGCSKDDVSYLDRRFSKKVRDNVYGNIYLDPLSLKFVDTEQFQRLRDLKQLGLTYMVYP
GAVHSRFEHSLGVFSLAGEAVHRIKAQQGSELGIDNLDIQTVKLAGLLHDVGHGPFSHMF
EREFLRQIPHGIKWCHEDMSVRMIDHIVDFHHIDIDAECLKKAKEMVIASTEHVSHKSVN
EKHFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCSFQIERLMDSMRVMGDEICYRDKDY
LTIYKLFSSRADLHRTVYTHAKVKAIEMMFVESLIKADDYLQISSKIQDPAEFWKIDDSI
LKTIEISHDQELKEARDLILRIRRRDLYQFCNEFSVPKDKLEHFKDITPQDIVCSQGNGD
ITLKEEDVVVCNVKIDLTRGRSNPLENINFFQDFESNEKFPIHDYRISHLLPAFCEDRIV
RVYSKNPDLVKTVSEAFENFQLKTYGMKAQVHATPDRKRNRRRLEQSY
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgggaggttgtagcaaagatgatgttagttacctggatcgccgattctcaaagaaggtt
cgcgataatgtctatggcaacatttatctggatccgctctctttgaagttcgtcgatacc
gagcagttccagagacttcgagatctaaagcaactcggtctaacatacatggtttaccca
ggggctgtgcattctcgatttgagcactcacttggtgtattttcactggctggtgaagca
gttcacagaatcaaagctcagcaaggttcagagcttggtatcgataacttggatatacaa
acagtgaaacttgctggactactgcatgatgttggccatgggccattcagccacatgttt
gagcgtgagtttctccgtcagattcctcatggcattaaatggtgtcatgaggacatgtct
gtgagaatgatagaccacattgtcgatttccaccatattgatattgatgctgaatgccta
aagaaagcaaaggaaatggtcattgcaagcacagaacatgtttctcataaaagtgtgaat
gaaaagcatttcctatatgatattgttgcaaatggtcggaatggtatagatgttgacaag
tttgattacattgtgcgtgactcccgggcttgtggactgggctgcagttttcagattgaa
cggttaatggatagcatgcgagttatgggtgatgagatatgttatcgtgacaaggattat
cttacaatctataagttattttcctctcgtgctgatctgcatcgaacggtctatacacat
gcaaaagtaaaggctatagaaatgatgtttgttgaatccttgataaaagcggatgattac
cttcaaatttcatcaaaaattcaggacccagctgaattctggaagatagatgattcaata
ttgaaaaccattgaaatttctcatgatcaggagctgaaggaagctagagatttaatcctg
cgcattaggagaagagacctataccagttctgcaatgagttttctgttccgaaggacaag
ctagagcacttcaaagacatcactccacaggacattgtttgttcccagggaaatggtgac
attacactaaaagaagaagatgttgttgtctgcaatgtgaagatcgatttgacacggggt
agaagtaaccctctcgaaaacataaattttttccaggactttgagagcaatgagaaattc
ccgatacatgattatcgcatcagtcatttgctgccagctttttgtgaagataggattgtg
agggtgtattctaagaaccccgatctggtgaaaacagtttctgaggcttttgaaaatttt
cagctaaagacatatggaatgaaagcacaggtacatgcaactcctgataggaagaggaat
cgtcggaggttagaacagtcgtactga

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