Populus trichocarpa (black cottonwood): 7476847
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Entry
7476847 CDS
T01077
Name
(RefSeq) PH, RCC1 and FYVE domains-containing protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
BRX
BRX_assoc
FYVE
BRX_N
PH_12
LRS4
Tropomyosin
Mer2
Motif
Other DBs
NCBI-GeneID:
7476847
NCBI-ProteinID:
XP_024448771
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Position
1:complement(2009338..2020406)
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AA seq
1090 aa
AA seq
DB search
MATLEPALRVGPLERDVELAITALKRGAQLLKYGRRGRPKFCPFRLSNDESALIWISGKE
EKHLKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKEEAEVWFTGL
KALISHHQLWKKREETRNDGLLSEANSPRAYTLRSSPLSFAFGSDDSSMKDGTDPLRLRT
PYDSPPKAGLEKALSDAVYTVPPKVLFPLESACGPGSDETTGRMKNTNTEAFRVSLSSAV
SSSSQGSGRDDNDALGDVYIWGEGTGEGILGGGVHKSGGSDIQMDSFVPKALESAVLLDV
QAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEY
LSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPWHTAVV
TSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSS
SSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVALTTSG
QVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKG
ANGRLGHGDTDDRNFPSIVEALKDKQVKGIICGTSFTAAICLHKWVSGIDQSMCSGCRLP
FNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDYCFSKIRRSTGTDSSVH
STLRRRGSENQGLNEITEKSENSNTRSHAKLGRNFSMESSKEVESISSRRNRKSSSISTQ
VSPSAYDVSQRNAFNNSKSFGSSKKFFSASVPGSRIVSRATSPTSRRSSPPRATTPTPAL
SVHELPKVAVDGTGRLNDSLREEVVKLRAQVEELTHKAQLQEVELERTTSQLKEAVAVAE
EETAKCKAAKEVIKSLTAQLKDVAERVPVGAARNNNSPSFYYSSNTPLRAVSPGVLEQLR
GPRTCHEQDSNGSNSLVVSNVSAPTTNQTPHHSEVAHIEATLRNKNRTAKVEPTNGDEWV
EQDEPGVYITLVSLPGGAKDLKRVRFSRKRFSEKQAEQWWASNRARLYQQYNVPMGERSL
VSVGREGLAH
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggctactttggagccggcgttgagagtgggccccttagagagagatgttgaattggcc
atcactgctcttaaaagaggagctcagttgctcaagtatggccgtagagggaggcccaag
ttttgccccttcaggctgtcaaatgatgaatctgctctaatatggatatctgggaaagag
gagaagcatcttaaactaagccatgtctccagaattatccctggtcagcgcactccaatt
tttcagaggtatcctcgtcctgagaaggaataccagtcattttctctaatttataatgac
aggtctttagatttgatatgcaaggacaaagaagaagctgaagtctggtttactggtcta
aaggcactaatatcacatcaccagctttggaaaaagagagaagaaactagaaatgatgga
cttttatctgaggcaaatagtcctagagcatacacccttagaagttctcctttgagcttt
gcatttggtagtgatgatagttcaatgaaggatggaacagatcctcttcgtcttcgtact
ccatatgatagtcctcctaaagctggtttagagaaggcattgtctgatgcagtatacact
gtgcctcccaaggttttatttccgttagaatctgcctgtgggccaggctcagatgaaaca
acaggtcgtatgaagaatacaaacacggaagcttttagggtcagtttatcaagtgctgtt
agttcatcaagtcaaggctctggccgtgatgacaatgatgctttaggggatgtttatatt
tggggtgaaggcactggtgagggcattctaggtggcggagttcataaaagtggaggttct
gatattcagatggattcttttgtgccaaaagccttggaatctgcagttctattagatgtt
caggctatagcttgtggtcggcaacatgctgctttggtaacaaaacaaggggaagttttc
tcttggggagaggaacttggtggcagacttggacatggtgtggactctgatgtctcacat
ccaaagtttgtagatggactaaaaaatttcaatgttgaacttgtagcatgtggagagtat
ctttcttgtgcggtaacactctctggtgatttgtacatatggggtggtaatgcttataat
tttgggctcctgggatgtggcagtgaagctactcagtgggttccaagaaagttaagtgga
cctctagagggaatacatgtctcatcagtttcatgtggaccatggcacacggctgttgta
acctctgctggccaattgtttacatttggagatggaacctttggggttttaggacatgga
gaccgaagtagtgtgtcaacacccagggaggttgagtcccttaagggcctccgcaccatg
cgagtagcttgtggtgtgtggcacacagctgcagttgttgaagtcatggttgggtcatca
agttccagtaattgttcttcaggaaaactcttcacgtggggagatggagataaaggtcgt
cttgggcatggtgataaggaagctagactggtgcccacttatgtagctactcttgttgaa
cccagcttctgtcaagttgcctgtggtcacagcctcactgttgctcttacaacctcgggc
caagtttacaccatgggaagccctgtatatggtcaattggggaatcctcaagcggatggc
aaggtccctactcgtgttgagggaaagctcatgaaaaactttgttgaagagttagcctgt
ggtgcttatcatgttgcagttttgacctcaagaactgaagtttacacatggggaaagggt
gcaaatggcagactaggccatggtgatacagatgatagaaatttcccatctattgttgaa
gctttgaaagacaaacaggttaaaggtattatctgtggcactagttttaccgcagctatc
tgtcttcataaatgggtatccggtattgatcaatcaatgtgttccggttgccgcctgcca
tttaatttcaaacggaaacggcacaattgttataattgtgggcttgttttctgccattca
tgcagtagtaaaaagtccctcaaggcttcaatggctccaaatcctaacaaaccttaccgt
gtctgtgattattgttttagcaaaattagaagaagcaccggaactgactcatcagttcac
tctactcttaggagaagaggaagtgagaatcagggactaaatgaaatcacagaaaagagt
gaaaattcgaatacaagatcacatgctaagcttggaagaaacttctctatggaatcatct
aaagaggtggaaagtatatcttccagaagaaacaggaagtcaagctccattagcactcag
gtttcaccctctgcttatgatgtttctcagcgtaatgcatttaacaactctaaatcattt
ggatcctccaagaaatttttctcagcttctgttcctggatcaagaattgtgtctcgagca
acatcgccaacatcaagacgatctagtccccctcgcgctacaacaccaaccccagctctc
tcagtacatgagttgccgaaagttgccgtggatggtactggaaggttaaatgacagcctg
cgtgaagaagttgtaaaattaagagctcaggtcgaagaacttacacataaagctcagctt
caggaagttgagctggaaagaacaaccagtcagttaaaggaggctgttgcagtagcagag
gaggagactgcgaaatgcaaagcagcaaaggaagtaattaagtcactcactgcccaattg
aaagacgtggctgagagggttcctgttggagcagcaagaaacaacaattcgccctctttt
tattactctagcaacactcctctacgggctgtttctcctggagttcttgagcaactccgg
ggtcccagaacatgtcatgaacaagattcaaacggatcaaacagcctggtagtttcgaat
gtgtcagcacccaccactaatcaaactccacatcactctgaagtggcacacatagaagca
acactaaggaataagaacagaacggcaaaagttgaacccactaatggtgatgaatgggtt
gagcaagatgaaccaggcgtatatattacccttgtttccttgcctggaggtgccaaagat
ctcaagcgtgtccgtttcagtcgaaagcgtttcagcgaaaaacaagcagaacaatggtgg
gcatccaacagagccagattatatcagcaatacaatgttcccatgggtgagaggtctctt
gttagtgtggggagggaagggttagcccattga
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