Populus trichocarpa (black cottonwood): 7476898
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Entry
7476898 CDS
T01077
Name
(RefSeq) bet1-like SNARE 1-1 isoform X1
KO
K08504
blocked early in transport 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7476898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7476898
Membrane trafficking [BR:
pop04131
]
SNARE
SNAP-25[C] (Qc)
Bet1
7476898
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Gene cluster
GFIT
Motif
Pfam:
SNARE
MafB
Motif
Other DBs
NCBI-GeneID:
7476898
NCBI-ProteinID:
XP_002307637
UniProt:
B9H8J7
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Position
5:complement(22355554..22360443)
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AA seq
123 aa
AA seq
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MNSRRDIRNNRAALFDGIEEGGIRASSSYSSHEIDEQDNERALEGLQDRVILLKRLSGDI
NEEVDNHNLMLDRMGNDMDSSRGVLSGTMDRFKMVFETKSSRRMFTLVASFVVLFLIIYY
LTR
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaggagggacatccgtaacaatagagctgctctttttgatggaattgaggag
ggtggcatcagagcctcatcctcttactcctcccatgagattgatgagcaagataatgaa
agagctttggaaggattgcaagatagagtcattctgctgaagagactgtcaggtgatata
aatgaagaggtggacaaccataatcttatgctagacagaatgggcaatgatatggattct
tccaggggagtgctgtcaggaaccatggatcgctttaagatggtatttgaaaccaaatca
agccgtagaatgtttacactcgtggcatcatttgtggtcctattcctaattatatactat
ctcactaggtaa
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