Populus trichocarpa (black cottonwood): 7480111
Help
Entry
7480111 CDS
T01077
Name
(RefSeq) heat stress transcription factor B-4b
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7480111
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7480111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
RsmJ
Motif
Other DBs
NCBI-GeneID:
7480111
NCBI-ProteinID:
XP_002298460
UniProt:
B9GG64
LinkDB
All DBs
Position
1:28753174..28755081
Genome browser
AA seq
270 aa
AA seq
DB search
MAFTVDRCEEMVFTVESQKAVPAPFLTKTYQLVDDPLTDHIVSWGDDETSFVVWRPPEFS
RDLLPNYFKHNNFSSFVRQLNTYGFKKVVADRWEFANEYFRKGAKHLLSEIHRRKTSQHH
HQHYPEQPPQFFQPEDGFSWIDPPFQSPKSSTDILTALSEDNQRLRRKNCMLLSELSHMK
NLYNDIIYFIQNHVKPMPYEQKAYNAAPKLIELGSSCQDQTICSSIQRAKNGTVLGQHSL
TLSTEESTSPVKLFGVPLSGNKRLHPEVID
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacagtggatagatgtgaagagatggtgtttactgtggagtctcaaaaggca
gttcctgcaccattcttaacaaaaacatatcagctggttgatgatcctcttactgaccac
attgtgtcttggggtgatgatgaaaccagctttgttgtgtggagacctcctgagttttca
agggatcttcttcccaactatttcaagcacaacaacttctcaagcttcgtcaggcagctc
aatacctatggattcaagaaggtagtagctgacagatgggagtttgcaaatgagtacttc
agaaaaggagcaaagcacttgttatctgagatccacaggagaaaaacatcccaacaccat
caccagcactaccctgagcaaccaccccaatttttccaaccagaagatggttttagttgg
atcgaccctccatttcaatctccaaaatcaagtactgacatcctaactgcactctcagaa
gataatcagcgactgagaaggaaaaactgcatgcttttatcagaactctcccacatgaag
aacctctataatgacattatctacttcatccaaaaccatgtaaaaccaatgccctatgag
caaaaggcttataatgcagcacctaagctaatagaactgggctcttcatgtcaggatcaa
accatttgttctagcattcaaagagctaagaatggtactgttttgggtcagcattcattg
acattaagtactgaggaatcaactagtcctgtgaagctctttggagtccctctcagtggc
aataaaaggctgcatccagaagtgatcgattag
DBGET
integrated database retrieval system
