Populus trichocarpa (black cottonwood): 7481612
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Entry
7481612 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7481612
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
7481612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pop03400
]
7481612
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
7481612
DNA repair and recombination proteins [BR:
pop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
7481612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Glyco_transf_15
Motif
Other DBs
NCBI-GeneID:
7481612
NCBI-ProteinID:
XP_024465301
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All DBs
Position
10:17587239..17589960
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AA seq
404 aa
AA seq
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MCSSNAKVTTGVEITPAVARINGRPVLQPTCNRVPTLERHNSLKKTAPKSPPPPPPPLPP
PTSANKTNKASPPLSPKSKSPRLPAIKRGSDANSLNSSSDKVVIPRSTAKTPILERKKSK
SFKETSVGSGALSSSIEASLSYSSSLIVEAPGSIAAVRREQMALQHAQRKMRIAHYGRSK
SSRFEAKVVPVDSSINVTTKTDEEEKRCSFITANSDPIYVAYHDKEWGVPVHDDKMLFEL
LVLSGAQVGSDWTSILKKRQDFRDAFSGFDAEIVANITEKQMMSISAEYGIEISRVRGVV
DNSKRILEIKKEFGSFDRYIWTFVNNKPFSNQYKFGHKIPVKTSKSETISKDMVRRGFRF
VGPTMVHSFMQAVGLTNDHLITCHRHLPCTLMAARRPTEAQADQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagctctaacgctaaggtgaccacaggagttgaaataacaccagcagtggccagg
atcaatggccggccagtccttcaacctacatgtaatcgtgtacctacgcttgaaaggcat
aattctctaaagaaaacagcaccaaagtctcctcctcctcctccaccgccactacctcca
ccaacttctgctaataagaccaacaaggcctcacctcctttatccccaaagtcaaagtcc
cccagattaccagctattaagagagggagtgatgctaatagcttgaattcaagttctgat
aaggtcgtgattccaagaagcactgcaaagacaccgattttagagagaaagaagtcgaaa
agtttcaaggaaactagtgttgggagtggagcactttcttcttctattgaggcatcgttg
agttattcttcttctttgatcgtggaggcaccagggagcattgctgccgtgaggagagaa
caaatggcactccaacatgcacagagaaagatgagaattgctcattatggaagatcgaag
tcctccaggtttgaagctaaagttgttcctgttgattcttcaatcaatgtgacaacaaag
actgatgaagaagaaaagagatgcagttttatcacagcaaattcagatcccatctatgtt
gcataccatgataaagaatggggagttccagtccatgatgacaagatgttatttgaattg
ctagttctaagcggtgctcaggttggctcggattggacttcaatcttgaagaaacgccaa
gatttcagggatgcattttcaggatttgatgcagaaattgtggccaacattactgaaaaa
caaatgatgtcaatcagtgcagaatatgggattgagattagccgagtccgaggtgttgtg
gacaactctaaaagaattctcgagatcaaaaaggagttcgggtcatttgacagatacata
tggacatttgtgaataacaagcctttctccaaccaatacaaatttgggcacaagattcca
gttaagacatcaaaatcagaaactataagcaaagacatggttaggagggggttcaggttt
gttggtccaaccatggttcactctttcatgcaagctgtagggttaaccaatgaccacttg
atcacctgccacaggcatcttccatgcaccttaatggcagcccgcaggcctaccgaggca
caagctgatcaatag
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