Populus trichocarpa (black cottonwood): 7485119
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Entry
7485119 CDS
T01077
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7485119
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
7485119
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
7485119
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Met_10
FtsJ
MTH865
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
7485119
NCBI-ProteinID:
XP_002300386
UniProt:
B9GFZ0
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All DBs
Position
1:complement(38735872..38741870)
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AA seq
612 aa
AA seq
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MAPAAKINKKKGSETQRPPPKKKQKNDLLTEKRRPKKDDVLGDSDTDNPDEELEHQLEFS
EDDEQEESASGSDVLSDGDDDPLADDFLQGGSDDEEKGSGSDSDSDSDEDSDEEDIEKKS
RAIDEQRAREQKEAEEEMKLNIAEESDEFRLPTQKELEEEALRPPDIQSLQRRINEIVRV
LSNLKDLKQEGSSRKDYVHQLKIDLCKYYGYNEFLIGALVEMFPVNELMELIEAFEKPRP
TCLRTNTLKTRRRDLANVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGHYMLQ
SASSFMPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGIIYANEIKAQRLRSLTANL
HRMGVTNTIVCNYDGRELPKTLGLNTVDRVLLDAPCSGTGVISKDESVKISKTSEDIEQC
AHLQKQLLLAAIDMVDANSKSGGYIVYSTCSIMVAENEAAVDYALKKRNVKLVPCGLDFG
RPGFVRFRQHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKLSNSIPSAGTEPSESVEQAYG
LNESDREKSTSTEKGKSLTNGFPNDGTPENPSSAKRGMKRKIPSREEISKSREEKRAAYR
EANRNAAKNSRK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcacctgctgctaagattaacaagaaaaagggctcagaaacacaaagaccaccaccc
aaaaagaagcaaaagaacgatcttcttactgaaaaacgccgcccaaagaaggatgacgtg
ttgggtgattctgatacggataacccagatgaagaattagaacatcagttagagtttagt
gaagatgacgagcaagaagaatctgcttctgggtctgatgttctttctgatggtgatgat
gacccccttgctgatgattttttacaaggaggaagtgatgatgaagagaaaggttcaggt
tccgattccgattccgattctgatgaagattctgatgaagaggatattgagaagaagtca
agagctatcgatgagcaaagggcaagggaacagaaagaagctgaggaggaaatgaagcta
aatattgctgaagaatctgatgagtttagattacctactcagaaggaacttgaagaggaa
gccctccgcccccctgatattcaaagtctccaaaggaggattaatgagattgttcgagtg
ctttcgaatttaaaagacttgaagcaagagggttcttcaaggaaggattacgttcaccag
cttaagattgatttatgtaaatactatggctataatgaattcctgattggagctctagtg
gagatgtttcctgttaatgaacttatggagcttattgaagcttttgaaaagccaagaccc
acatgtctacgaaccaacaccttaaagacacgaagacgggatttagccaatgtgctttta
aacagaggagtaaaccttgatcctttaagcaagtggtctaaggttggactagttgtgtat
gattcacaagtaccaattggtgccactcctgaatatatggctggtcactatatgctccaa
agtgcaagctcgttcatgcctgtgatggcccttgcacctcaagaaaaggaacggattgtt
gatatggcggctgcgccaggtggtaaaacaacatacatcgctgccttgatgaaaaatagt
ggaataatttatgcaaatgagataaaggcccaaagacttaggtctctcactgcaaatttg
catcgcatgggggtgacaaacaccatagtttgtaactatgatggaagggagcttcccaag
actttaggtctcaacactgtagacagagtgttgttagatgccccttgcagtgggactggg
gttatatctaaagacgagtctgttaaaatttctaaaacctctgaagacatagagcaatgt
gcccatttacagaagcaattgctacttgctgcgattgacatggttgatgcaaattcaaaa
tctggtggatacattgtttactccacatgttccataatggttgctgagaacgaggcagct
gttgactatgcactcaagaagagaaatgttaaactcgtgccgtgtggacttgactttggg
cgtccagggtttgtccgctttaggcagcaccgttttcacccatccttggaaaagacaaga
cgtttctaccctcatgttcacaacatggatggattttttgttgcaaagttgaagaaactg
agtaactcaataccctctgccgggaccgaaccgtcagaatctgtggagcaagcctatgga
ctgaatgagagtgatagggaaaagagtacttccacagaaaagggtaaaagcttaacaaat
ggttttcctaatgatgggactccagagaatccatccagtgctaaacggggaatgaaacga
aaaattccatctagagaggaaatttcaaaatccagggaggagaaaagagcagcttataga
gaggctaatcggaatgctgcaaagaacagtaggaagtga
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