Populus trichocarpa (black cottonwood): 7489595
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Entry
7489595 CDS
T01077
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7489595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7489595
04147 Exosome [BR:
pop04147
]
7489595
04090 CD molecules [BR:
pop04090
]
7489595
Enzymes [BR:
pop01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
7489595
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
7489595
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7489595
CD molecules [BR:
pop04090
]
Proteins
7489595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
Zeta_toxin
AAA_22
RsgA_GTPase
AAA_16
AAA_30
DUF87
Glyoxalase_3
Motif
Other DBs
NCBI-GeneID:
7489595
NCBI-ProteinID:
XP_002316309
UniProt:
B9HTN2
LinkDB
All DBs
Position
10:complement(19922156..19930215)
Genome browser
AA seq
1397 aa
AA seq
DB search
MMIPRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDASAEAAAAAAQAEAEEEIDEAEEM
EAPPAAVPFSRLFACADRLDWGLMIVGSLAAAAHGTALVVYLHFFGKIIGVLRIQQGERF
DRFTNLAMHIVYLAVGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGN
NGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFVNCWQIALITLATGPFIVA
AGGISNIFLHRLAESIQDAYAEAASIAEQALSYTRTLYAFTNETLAKYSYATSLQATLRY
GILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTDHKAHGGEIVTALFAVILSGLGLNQ
AATNFYSFDQGRIAAYRLFEMISRSSSTVNQDGDSLVAVQGNIEFRNVYFSYLSRPEIPI
LSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLESLRSQ
VGLVTQEPALLSLSIIDNISYGRDATMDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLA
LTEEQKIKLSIARAVLLNPTILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLS
LIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLKCEEAAKLPRRMPVRNYTETAAFQ
VEKDSSTGHSYQEPSSPKMAKSPSLQRVPGIFRPPDGMFNSQESPKVLSPPPEKMIENGL
PLDGADKEPSIRRQDSFEMRLPELPKIDVQSAHRHTSNGSGPESPVSPLLTSDPKNERSH
SQTFSRPHSHSDDVPIKVKEARDVKHQKEPPFWRLAELSLAEWLYAVLGSIGAAIFGSFN
PLLAYVISLIVTAYYRQEHHLRQDVDRWCLMIAIMGIVTVVANFLQHFYFGIMGEKMTER
VRRMMFSAMLRNEVGWFDEEDNSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAV
VIGMLLQWRLALVALATLPVLTVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTV
VAFCAGNKVMELYRLQLKKIFKQSFVHGMAIGFGFGFSQFLLFACNALLLWYTAYSEKNL
HVDLHTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDREPKIDPDDNSALK
PPNVYGSIELKNVDFCYPTRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFY
DPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIKENIIYARHNASEAEMKEAA
RIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESE
SSRVVQEALDTLVMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHNSLMAKNGLYV
RLMQPHFGKGLRQHRLI
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgatgatccccaggggattattcggatggtccccacctcatatacaaccactgacgccg
gtatcggaggtttccgagccgccggagagtccttctccgtacttagatgccagcgcggag
gcggccgcggctgccgctcaggcggaagcggaggaggagatcgacgaggctgaggagatg
gaggcgccgccagctgctgttccgttctcgaggttgtttgcttgtgctgataggttagac
tgggggctcatgatcgttggttcgcttgcagctgctgcgcatgggactgctcttgttgtt
tacttgcatttctttgggaagattattggggttttgaggattcagcagggggagcgattt
gacaggtttactaatcttgccatgcacattgtatacttagctgtgggtgtttttgctgct
ggttggattgaggtttcctgctggattctaactggggaacgacagactgcggtcatcagg
tcgaagtatgttcaagtattactcaatcaggacatgagcttttttgacacctatgggaat
aacggggatattgttagccaagtattgagtgatgtgctcctcattcaatctgctttgagt
gaaaaggttggaaattatattcataacatggctacgttttttagtggtcttgttattgga
tttgtcaactgctggcagattgcactcataactttagccactggcccattcattgttgct
gcaggaggtatctcaaatatatttcttcataggcttgctgagagcattcaagatgcatat
gctgaagcagctagcattgctgaacaggcactgtcttacactaggaccttatatgcgttc
acaaatgaaactctggccaaatattcatatgcaacgtcactacaagcaactttgagatat
ggtattttaattagccttgttcaaggacttgggcttggttttacatatggacttgcaata
tgttcttgtgccttgcaactttgggttggaaggtttctggttacagatcataaagctcat
ggtggtgaaatagtgacagccctctttgctgtaattttaagtggccttgggctgaatcaa
gctgcaaccaatttctattcatttgatcaaggacggatcgctgcttatagactttttgag
atgataagtagatcatcctccacagttaatcaggatggagacagcctagtggcagtgcaa
ggaaatatcgagtttcggaatgtttattttagctatctatctcgtcctgagatccccatc
ttgagtggattttacctcactgtaccagctaaaaaagcagttgctcttgttggcagaaat
ggttctggaaaaagcagcattatcccactcatggagcgcttttatgatcctaccttagga
gaagttcttcttgatggagagaacataaaaaacctgaaactggaatcgctcagaagccaa
gtaggactggtcacccaggaacctgccttgttaagtttgagtataattgataacatttca
tatggacgagatgctactatggatcagattgaagaagctgccaaaatagcacatgcacat
acatttatcagttcacttgagaaaggctacgagacacaggtgggtagggctggtttagca
ttgacagaggagcagaaaattaaactttctatcgccagagcagtgcttttgaatccaaca
attcttctgcttgatgaggttactggtggacttgattttgaagctgagagagcagttcaa
gaggcactagatcttctgatgttgggccgttcaaccattataatagctagacgtcttagt
ctaatcaggaatgctgattatatagctgtaatggaggagggccagcttgttgaaatgggt
acacatgacgaactattaaccttggatggtctgtatgcagagcttctcaaatgtgaagaa
gcagcaaaacttccaaggaggatgccagttagaaactacacagagactgctgctttccaa
gttgaaaaggattcttctacgggccatagctatcaagaaccatcctctcctaaaatggca
aagtcaccatcgcttcagagggtccctggtatatttcggcctccagatggcatgtttaat
tcacaagaatcaccaaaagttctcagcccaccaccagagaagatgatagaaaatggtctt
cccttggatggtgctgataaggaaccatcaataagaaggcaggatagttttgaaatgaga
ctccctgagttacccaagattgatgtccagtctgcacatcgacatacatcaaatggttca
ggccctgaatcccctgtttctccacttttgacatctgatcctaaaaatgagcgttcccac
tcacagacttttagtcgaccccacagtcactctgatgatgttccaattaaagtgaaggaa
gcaagggatgtaaaacatcagaaagaaccaccattttggagactagcagagcttagtctt
gcagagtggctttatgctgtgttaggaagcattggtgctgctatttttggttctttcaat
ccacttcttgcttatgttatttcactgatagtgactgcttattatagacaagaacaccac
ttgcgacaggatgtagacaggtggtgcttgatgattgccatcatgggtatagtgactgtt
gttgccaatttcttgcagcacttctattttggcatcatgggagagaaaatgactgaacga
gtccgcagaatgatgttttcagcaatgctacggaatgaagttggatggtttgatgaagag
gataatagtgctgacacattatccatgcgcttagcaaatgatgctactttcgtacgagct
gcattcagcaatcgactttcaatatttatacaggacagtgccgcagttattgtggctgtt
gtcattgggatgctgcttcagtggcgattggctcttgtggcattggcaaccctgccagtt
ctcactgtctctgcaattgcacagaagttgtggcttgctggattttctaggggcatccag
gagatgcacagaaaggcatcactggtccttgaggatgctgttagaaacatttatactgtc
gtggcattctgtgctggcaacaaagtaatggagctctacagattgcaactgaagaaaata
tttaagcagagttttgtccatggaatggccattggttttggatttggtttttcacagttt
cttctttttgcctgtaatgcccttcttctctggtacactgcatactctgaaaagaatctc
catgttgatcttcatacagctctcaaggagtatatggttttctcttttgcaacatttgca
ctggtggaaccttttggattggctccatacatacttaagcggcgaaaatctcttatttca
gtatttgaaattatagatcgagaacctaagattgacccagatgataactcagcactgaag
cctccaaatgtttatggaagcatcgagttgaagaatgtggatttctgttatccaactcgc
ccagaagtgttggtattgagcaatttcagtctcaaagttaatggaggacaaactgtagct
gtggtgggagtttcagggtctggaaaaagcactataatttctttaattgagagattttat
gatccagttgctggtcaggtcctgctggatggtcgggatttaaaactttataatttgaga
tggttgaggaaccatctaggtcttgttcagcaggaaccaattatcttttcaacaactata
aaagaaaatattatatatgccaggcacaatgccagcgaagctgagatgaaagaggctgct
agaattgctaatgctcaccatttcatcagtagcctgcctcatggttatgacacccatgta
ggaatgaggggcgtggaccttaccccaggacagaagcagagaattgcaattgctcgagta
gtgctcaagaatgcacccatcttgttattggatgaagccagctcatccattgaatctgaa
tcaagtcgtgtggtacaagaggcactagatactctggttatgggaaacaaaactaccatt
ctgatagctcatagagcggcaatgatgaggcatgttgataacattgtggttctaaatgga
gggcgaattgttgaggaagggacccataattctttgatggcaaagaatggtttgtatgtc
agattgatgcagccccactttggaaagggtttgcgtcaacatcgactaatttaa
DBGET
integrated database retrieval system
