Populus trichocarpa (black cottonwood): 7496532
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Entry
7496532 CDS
T01077
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7496532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7496532
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7496532
Membrane trafficking [BR:
pop04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
7496532
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
7496532
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7496532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
Ank_5
Ank_3
Ank_4
PH
BAR
PH_11
PH_8
PH_20
BAR_2
PH_13
GldM_1st
DUF6760
Motif
Other DBs
NCBI-GeneID:
7496532
NCBI-ProteinID:
XP_002303749
UniProt:
B9GZ26
LinkDB
All DBs
Position
3:17274158..17283771
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AA seq
830 aa
AA seq
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MHFTKLDDSPMFRKQIQSLEEDAESLRERSLKFYKGCRKYTEGLGEAYDGDVGFASALET
FGGGHNDPISLAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLHFVNIDLLEVKE
ARKRFDKASLLYDQAREKFLSLRKGTRSDVAILLEEELHNARAVFEQARFHLVTAISNVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYIHQVLTYAQQSRERSNYEQASLNER
MQEYKRQIDRESRWSSNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLS
KRSSSLRGDWKRRFFVLDSRGMLYYYRKQSSKPSGSGGQLSGQRNSSELGSGLLSRWLSS
HHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWI
EKITGVIASLLSSQAPERCLSASPLGSGHHRSASESSSFESTDFDPSAVDEYASERSHAA
LHHERAFRSSQQQRTSAEKPIDVLQRVCGNDKCADCGAPEPDWASLNLGVLICIECSGVH
RNLGVHISKVRSLTLDVKVWEPSVISLFQSLGNAFANSVWEELLQSRSALQVELIPTGSF
KSDKPQLLFIGKPNPADSISVKEKFIHAKYAEKVFVRKPRDNQNSQSVAQQIWEAVRAND
KKAVYRLIVHHEADVSAVYEQASCSSSLTLAKAMLLQEQTNPEQLSSYSTGNSLDRSSTS
SLNFAGSSEGLTLEDLDGCTLLHLACETADIGMLELLLQYGANINSTDSRGQTPLHRCIL
RGRPFLAKLLLSRGADPRAVNGEGKTPLELAIESGFDESEVLALLSDSNG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcacaaagctcgatgactctcctatgtttcgaaagcagatacaatcactggaa
gaagatgctgaatcattgagggagagaagtttaaagttctacaaaggatgtagaaaatac
actgaagggctgggggaggcatatgatggggacgttggttttgctagtgctttagaaaca
tttggtggagggcataacgatcctattagtttggcttttggaggccctgttatgaccaaa
ttcaccatagccttgagagaaattgggacatacaaagaagttctccgatcccaggttgaa
catatgctgaatgacagattattacactttgtcaatattgatttgcttgaggtgaaggaa
gcaaggaagcgttttgacaaggctagccttctttacgaccaggctcgtgagaagtttctg
tcactgaggaaaggcacgaggtctgacgtggctattcttttagaggaggagcttcataat
gcaagggctgtgtttgagcaagctcgctttcatctagtaactgctatttctaatgtcgaa
gcaaagaagaggtttgaatttttggaagcagtcagtgggacaatggatgcacatcttcgt
tacttcaaacagggctatgagcttttgcatcaaatggagccatacattcatcaggttttg
acttatgctcaacaatcaagggaaagatctaactatgagcaggcatctctcaatgaaagg
atgcaagagtacaagagacaaattgatcgtgagagtagatggtcttccaatggttctaat
ggatctccaaatggagacggtatacaagccattggtagaagttcacacaaaatgatagag
gctgttatgcaatccgctgcaaaggggaaggttcaaactatcagacaaggttatctgtca
aaacgatcctctagcttgagaggtgactggaaaagaagattttttgttcttgatagccga
ggaatgctttattactatcgtaaacagagcagcaaaccttcaggttctggcggtcaactt
tctggtcaaaggaacagctctgagcttggatctggattgttaagtcgttggctttcttct
caccatcatggtggagtgcatgatgaaaagtctgttgctcatcacaccgtgaaccttctt
acatcaacaatcaaagtcgatgctgaccagtcagatctgcgattttgcttcaggatcatc
tcaccaacgaagaactacacgttgcaggcagagagtgcactggatcaaatggattggatt
gaaaaaataacaggggttattgcttcactactaagctcacaagctcctgagaggtgtctc
tcggctagtcccctgggaagtggtcatcatcggtctgccagtgagagtagttcatttgaa
agtactgattttgatccttctgctgttgatgaatatgcatctgagaggagccatgccgcc
ttacatcatgaacgagcattcagaagttcgcaacagcaacgaaccagtgcagagaagcca
attgatgtgttgcaaagagtttgtggaaatgataaatgtgctgattgcggtgcccctgag
ccagattgggcatctctaaatcttggagttcttatttgcattgaatgttctggtgttcac
cgtaatcttggtgtacatatatcaaaggtaaggtcacttacactcgatgtcaaggtgtgg
gagccatcagtcataagtttgttccagtctctgggaaatgcctttgctaactcagtctgg
gaggaattattgcaatcaagaagtgccttgcaggttgaactcatccccacaggctcgttc
aagtccgataaaccacagctgctctttatcggcaaacccaatcctgccgattctatatct
gtaaaggagaagtttatccatgcaaagtatgcggaaaaggtatttgttcgcaagcctaga
gacaaccaaaatagtcaatcagtggcccaacagatctgggaagctgttcgtgccaatgac
aagaaggctgtataccgtcttattgttcatcatgaagcagatgttagtgctgtgtatgag
caagcatcttgtagctcttccctaacacttgctaaagcgatgctattgcaagagcagaca
aaccctgaacaactctctagctactcaacggggaattcattggataggtcttccactagc
tctttaaactttgcagggtcaagtgaaggcctgaccttggaggatctagatggttgtacc
ttgcttcaccttgcttgtgaaacagccgacattggcatgctagaactcctcttacagtat
ggtgcgaatataaattcaacagattctagaggtcagacaccgctccaccgttgtattctc
agaggcagacctttccttgcaaaattgctcctctcaaggggagcagatccacgagctgtt
aatggtgaaggtaaaaccccgctcgagcttgccatagagtccggctttgatgagagtgag
gtccttgcattattatcagactcaaatggttga
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