Populus trichocarpa (black cottonwood): 7496915
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Entry
7496915 CDS
T01077
Name
(RefSeq) ABC transporter B family member 13 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7496915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7496915
04147 Exosome [BR:
pop04147
]
7496915
04090 CD molecules [BR:
pop04090
]
7496915
Enzymes [BR:
pop01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
7496915
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
7496915
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7496915
CD molecules [BR:
pop04090
]
Proteins
7496915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_22
Zeta_toxin
DUF87
P-loop_TraG
ABC_ATPase
RsgA_GTPase
AAA_30
Vma12
nSTAND1
YobI-ATPase
Motif
Other DBs
NCBI-GeneID:
7496915
NCBI-ProteinID:
XP_024450124
LinkDB
All DBs
Position
2:complement(1184485..1190005)
Genome browser
AA seq
1246 aa
AA seq
DB search
MEELELTSDQVLDQNSLPKMERPSNSSKKPTVSIFGLFSAADKFDHFLMFLGLVGSCAHG
AVFPLFFVLFGHLIDSLGHVRSDPHQMSSQVSKYSLDLVYLGLGVFVAGWIGVASWMQTG
ERQTARLRLKYLQSVLRKDMNFFDIEARDSNILFHISSDAILVQDAIGDKTGHAVRYLSQ
FFIGFVFGFKSVWQLTLLTLAVVPLMAVAGGAYTIIMSTLSEKGEAAYAEAGKVADEAIS
QIRTVYSFVGEEKALEEYSKSLKKALKLGKKSGVAKGVGIGSTYGLLFCAWSMLLWYSSI
LVRRGDTNGAKAFTVILNVIFSGFALGQAAPNIAAISKGRAAAASIMSMIETDSSPSKNL
VDGIVMPKVSGQIEFCEVCFSYPSRSNMVFENLSFSISAGKNFAVVGPSGSGKSTVISMV
QRFYEPTSGKILLDGHDLKTLELKWLREQMGLVSQEPALFATTIAGNILFGKEDASMDQI
YEAAKAANVHSFVLQLPDGYHTQVGEGGTQLSGGQKQRLAIARAVLRNPKILLLDEATSA
LDAESELIVQQALEKIMANRTTIVVAHRLSTIRDVDTIIVLKNGLVVESGSHLELISKGG
EYASMASLQVSEHVTDASSIHSGTAGKSSFRELTSSQNQEVTTRELKSNDENLSPANFSP
TPSIWELVKLNAPEWPYAVLGSVGAMMAGMEAPLFALGITHMLTAFYSPDNSQMKKEVHL
VALIFVGAAVVTVPIYILQHYFYTLMGERLITRVRLSMFSAILCNEIGWFDLDENSTGSL
TSTLAADATLVRSTLADRLSTMVQNVSLTVTAFVIGFSLSWRVSAVIIACFPLLIGAAIT
EQLFLKGFGGDYRSYTRANAVAREAIANIRTVASFGAEERIAHQFASELNKPNKQVLLQG
HISGIGYGASQFFCFCAYALGIWYASVVISHNESDFDHVMKSFMVLVMTSYAIAETVALT
PDIMKGSQALESVFSILHRKTAMDPDDPTSKVITDIKGDVELRHVSFKYPARPDTIIFED
LNLKVSAGKSLAVVGQSGSGKSTVIALILRFYDPISGTVLIDGYDVKTLNLKSLRRKIGL
VQQEPALFSTTIYENIKYGNKNASEIEVMKAAKAANAHGFISRMHEGYHTHVGDRGLQLS
GGQKQRIAIARAILKDPSILLLDEATSALDTASEKLVQEALDKLMEGRTTVLVAHRLSTV
RDADSIAVIQHGRVVEIGSHNQLIGKPSGVYKQLVSLQQEKSFSYQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattagagcttacctccgatcaggtcttggaccagaattcacttccgaagatg
gagcggccatcaaattcaagcaaaaagcctactgtttcaatttttggtctattttctgct
gctgataaatttgaccatttcttgatgtttttaggactcgtcggttcatgcgctcatggt
gctgtgtttcctttgttctttgttttgtttggtcatctgattgattctctcggacatgta
cgttctgatcctcatcaaatgtcttcacaggtgtccaagtattccttggacctggtgtat
ttggggcttggagtttttgtagctggatggattggtgttgcatcttggatgcaaactggt
gagaggcagacagcacgtttgcgtctaaagtatcttcagtctgttttaagaaaggacatg
aactttttcgacatagaagctagagattccaacattttatttcatatatcaagtgatgcc
atactagtgcaagatgcaataggtgacaagacaggccatgcagttcgttatctttctcag
tttttcattggattcgtttttgggtttaagtcagtttggcaacttacgctcctcaccttg
gctgtggttccgttgatggccgttgccgggggagcctatactataattatgtctaccttg
tcagaaaagggtgaggccgcttatgctgaagctggcaaggttgcagatgaggctatttcg
cagatacgtacagtatactcattcgtaggagaggagaaagcactagaagagtactccaag
tcccttaagaaagctcttaaattggggaagaaaagtggggttgcaaaaggagttggtatt
ggatctacatatggactcctattttgtgcttggtcaatgcttctctggtattccagcata
ctagttaggcgtggggacacaaatggtgcaaaagctttcacagtgatactcaatgtcata
tttagtggatttgctcttggccaagctgctccaaatattgctgctatttccaaaggccgt
gctgctgccgccagtattatgagcatgattgaaacagattccagcccttctaaaaattta
gtagatggaattgtgatgccaaaagtatctgggcagatcgaattctgcgaggtctgtttt
tcttatccctcacggagcaacatggtcttcgaaaatttgagcttctcaataagcgctggg
aagaactttgcagttgtaggtccaagtggttcagggaaaagcactgttatatccatggtt
caacgtttctatgaacctacttcaggtaaaattctgctggacgggcatgatcttaaaact
ctcgaattgaaatggttaagagaacaaatgggattggtcagtcaagaaccagcattgttt
gctacaaccatagctggcaatattctgtttggtaaagaagatgcaagcatggatcagatt
tatgaagctgctaaagctgccaatgtacattcttttgttctacagttacctgatggttat
cacacccaggttggagagggaggaacacagctttctggtggtcaaaaacaaagactggct
atagcaagagcagtgctgaggaatccaaagatattacttttagatgaggccaccagtgct
cttgatgcagaatctgaactcattgtgcaacaagccctggagaaaattatggcaaatcgg
actacaattgtcgtcgcacaccggttatctacaattcgagatgttgatacaatcattgtt
ttgaaaaatggcctagttgttgaaagtgggagtcacttggaattgatatccaagggagga
gaatatgcaagcatggcgagtctgcaagtatcagaacatgttacagatgcaagctcgata
cattctggaacagctggaaaatctagctttcgagaacttacaagcagtcaaaatcaggaa
gttacaacaagagagctgaagtcaaatgatgaaaacttgtccccggctaacttttctccc
accccatccatttgggaactagtaaaactaaatgcaccggaatggccttatgcagtgctt
gggtcagttggcgcaatgatggctggcatggaagcacctctgtttgcccttggaattaca
catatgctgactgcattttattctcctgataattctcaaatgaaaaaagaggttcatctc
gtagctcttatttttgttggagcggctgttgttactgttcctatttatatacttcaacac
tacttttatacactaatgggggagcgtctgataactcgtgttcgcctatcaatgttctca
gctatcctttgcaatgagattggctggtttgatttagatgagaatagtactggctcactg
acatcaactttagctgccgatgcgaccttagttcgaagtactcttgctgaccgtctctca
acaatggtgcagaatgtatcactcactgtaacagcatttgttatcggcttttcattaagt
tggagggtgtcagctgttatcattgcttgcttccctctacttattggcgctgccataact
gagcaattatttctcaagggatttgggggagactatcgttcttacactagagcaaatgcc
gtggcacgtgaagcaattgcgaatattcgtaccgtagcttcatttggtgctgaagaacga
attgctcatcagtttgcatctgaactaaacaaaccaaacaaacaagtacttttacaggga
catatatcaggcattggatatggtgcatcccagtttttctgtttttgtgcatatgcactt
ggtatttggtatgcatcagtagtaatctcacacaacgaatccgatttcgatcatgtcatg
aagtccttcatggttttggtaatgacttcatatgctatagcagaaacggtagcgctcaca
ccagacattatgaagggttcacaagcactagaatcggttttcagtattctccataggaaa
acagccatggaccctgatgatcccacgtcaaaggtgataactgatatcaaaggggacgta
gagctcagacatgtgagtttcaagtatcctgcaaggcctgatacaattattttcgaggat
ttaaatctcaaagtttcagctggcaaaagccttgctgtggtgggccaaagtggatcaggg
aaaagtactgtaattgccttgatactgaggttctacgaccccatttccggaacagttctt
attgatggatatgatgttaagaccttgaacctgaaatcattaaggcggaaaataggactg
gttcaacaggagccagcattgttttcgacaacaatttacgaaaacatcaagtatgggaat
aaaaatgcttcagaaattgaagtgatgaaggcagccaaagcggccaatgctcatggattc
atcagcagaatgcatgaaggataccatactcatgtgggtgatagaggactgcagttatca
ggggggcagaaacagagaatagcaattgctagagctatacttaaagacccttctattctt
cttttggatgaagctacaagtgccttggatacagcatctgaaaagttggtccaagaggct
ttagataaactcatggaaggcagaacaacagttctggtagcacacaggttgtcaactgtt
cgcgacgctgatagcattgcagtgattcaacatgggagggtggtcgaaatcggaagccat
aaccagcttattggaaaaccttctggtgtttataaacaactagtcagtttacagcaagaa
aagtcattttcctatcaataa
DBGET
integrated database retrieval system
