Pseudomonas oryzihabitans: APT59_08850
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Entry
APT59_08850 CDS
T04267
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
por
Pseudomonas oryzihabitans
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
por03009
]
APT59_08850
03016 Transfer RNA biogenesis [BR:
por03016
]
APT59_08850
Enzymes [BR:
por01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
APT59_08850
5.4.99.29 23S rRNA pseudouridine746 synthase
APT59_08850
Ribosome biogenesis [BR:
por03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
APT59_08850
Transfer RNA biogenesis [BR:
por03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
APT59_08850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ALZ84310
UniProt:
A0A0U4W3A6
LinkDB
All DBs
Position
complement(1941319..1941954)
Genome browser
AA seq
211 aa
AA seq
DB search
MPLSNIRIIHQDNALLVVDKPTLLLSVPGRAEDNRDCLVTRLQENGYPEARIVHRLDWET
SGVIVLARDADSHRELSRQFHDRETEKAYTALCWGEPDANSGRIELPLRYDPPTKPRHVV
DHELGRHALTFWQVLERHGHYSRVELTPITGRSHQLRVHMLSIGHPLLGDQLYARGDALS
AQPRLCLHASLLALTHPVSGERMSFTSPAPF
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctccaacatccgcatcattcaccaggacaacgccctgctggtggtcgacaag
cccaccctgctgctgtcggtccctggtcgtgccgaagacaaccgcgactgcctggtgacc
cgcctgcaggaaaacggctatcccgaggcgcgcatcgtccaccgcctggactgggaaacc
tccggtgtcatcgtactggcgcgggatgccgacagtcatcgcgaactgtcgcggcagttc
catgatcgcgagacggaaaaggcttataccgccctgtgctggggcgagccggacgccaac
agcggccgcatcgaattaccgctgcgctacgacccgccgaccaagccgcgccacgtggtg
gatcacgaactgggacgtcacgccctgaccttctggcaggtgctggaacgccatggtcat
tacagccgggtggagctcactcctatcaccggacggtcgcatcagctgcgggtccatatg
ctgagcatcggacacccactgctgggcgatcagctctatgcccggggcgatgccctttcc
gcccaaccgcgcctttgcctgcacgccagcctgctggcattgacccatcccgtctcgggc
gagcgcatgagcttcaccagtcccgcccccttctga
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