Pseudomonas oryzihabitans: APT59_13635 Help Entry APT59_13635       CDS       T04267                                  Name (GenBank) ATP-dependent DNA helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism por  Pseudomonas oryzihabitans Brite KEGG Orthology (KO) [BR:por00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:por03400]     APT59_13635 Enzymes [BR:por01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      APT59_13635     5.6.2.6  RNA 3'-5' helicase      APT59_13635 DNA repair and recombination proteins [BR:por03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     APT59_13635 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD Helicase_C Lhr_WH ResIII Motif Other DBs NCBI-ProteinID:  ALZ85184 UniProt:  A0A0U4VPL7 LinkDB All DBs Position complement(2983942..2988285) Genome browser AA seq 1447 aa AA seqDB search MTSISPAAVLADFHDAPRSWFTTRFPAPTEAQLQAWPAIRAGASVLVAAPTGSGKTLTAF FAVLDGLVQEALREGGLPETCLWLYVSPLKALSNDIRLNLEEPLAGISAALEARDLPPLG LRTAVRTGDTPQKERAAMRRRPPHLLVTTPESLYVLLGSDSGRRMLGSVRGVIVDEIHAI ADGKRGSHLTLSLARLEALAGRPLQRIGLSATQKPLAAVAAFLVGRDAKGQARPCTVVDI GHQRARDLALEVPPVPLEAMLSTHAWELVYDRLAELAEAHRTTLVFVNTRRLAERMARQL SDRLGNGQVAAHHGSLAKEQRLDAEQRLKRGELRLLLATASLELGIDIGDVDLVCQIGSP GSIAAFLQRVGRANHQVGGLPKGRLFPTSRDDLVECVALLDCVRRGELDTLHIPQAPLDV LAQQLVAEVACQEWSETALLAVLRQAEPYAALEEADYTAVVEMLSQGYTDRRGPRAAYVH RDAVNGLLRGRRGGKATAVMSGGTIPESGDFSVLLEPQGHTVGSVNEDFAFESLVGDVFQ LGNTAYRIIKIEGSKVRVEDAKGQPPNIPFWHGEAPGRSDELSAGLARLRAELEPLLPGT DEPPEPAIARIGAAYELEEGAARQLVDYLGRARQALGALPTQQTLVMERFFDQAGGMQLI IHAPFGSRINRAWGLALRKRFCRNFNVELQAAATENALILSLATSHSFVLDEVWRYLHPA TAETVLVQALLDAPLFAVRWRWNATTALALPRFSAGRKVATQVQRMRSEDLLATVFPDQV ACLENLVGERQVPDHPLVRQTLDDCLHESLDSRGWLALLARITGGQLTLLTRDLPGPSPL AAEVLTAKPYAYLDDAPVEERRTLAVQNRRFGGADPDELGALDPAAIALVRDEAWPRLET ADDLHEALLGVGFLTEAELTRHQSQVRQLVKAGRAGCLRLPEATLWIAAERLPLFQVLFP EASTEPPLSPPPGFKAPADPETALVELLRARLTALGPVDQRPLAASLGLPPERLTPALLV LQSEGYVLQGRFTEADGAVEWCERHLLARIHRYTLGRLRKAIEPVALADYLRFLLEHHHL AGLATLRGGEGLEQVIGLLEGFEVAAAGWEGEVLPSRLPDYQFTHLDDLCRAGRVVWLRL PQPGRGGGGPVKGSPIVLLPRRHLADWNSLTTPPLAEALSPKGQRVLEVLTRRGASFFDE LLGEARLLRSELETALGELVGMGAVNADSFAGLRALLLPAAKRGSRTGLRRGRMPLYGGM DDAGRWAALRLAEGPTEERLPDALLERLVWLLLRRYGVLCWQLLQRESEVLPPWRDLLRA CHRLEARGEIRGGRFIAGLSGEQFADPAAIAPLREWRQRPPEDLWVCVSALDPLNLVGTL LPGAKVPAVAGNRLLYRDGVPIATRVGAKVNWLVELEAGEQVRARQALQQLGRERPQVGL GRSLLRQ NT seq 4344 nt NT seq  +upstreamnt  +downstreamnt atgacctcgatatcgcctgccgccgtcctggcggactttcacgacgcgccgcgcagctgg ttcacgacgcgctttcccgctccgaccgaggcgcagctgcaggcctggccggccattcgc gccggcgcctcggtgctggtggcggcccccaccggctcgggcaagacgctgaccgccttc ttcgccgtgctggatggcctggtgcaggaggcgttgcgggaaggcggcctgcccgagacc tgcctctggctctatgtgtcaccgctcaaggctctgtccaacgacatccgtctcaatctc gaagaacccctggccggcatcagtgcagcgctggaggcgcgggatttaccgcccttgggg ttacgcacggcggtgcggacgggggatacgccacaaaaggagcgggcggcgatgcgtcgg cggccgccgcacctcctggtcaccacgcccgagtccctctatgtgctgctcggctcggat tccgggcggcggatgctgggtagcgtccgcggtgtgatcgtcgacgagatccacgccatt gccgacggcaagcgcggcagtcacctgacgctgagcctggcgcgactggaggccttggcg gggcgtccactgcaacgcatcggcttgtccgctacccagaaacccctggccgccgtcgcc gcctttctggtcgggcgcgatgccaaggggcaggcacgaccctgtacggtggtcgacatc ggccaccagcgtgctcgcgatctggccctggaggtgccccccgttcccctggaggcgatg ctctccacccacgcctgggagctggtctacgaccgcctcgccgaactggccgaggcacac cgcaccaccctggtgttcgtcaacacgcggcgcctggccgagcgcatggcgcgtcagctc tcggatcgcctcggtaatggccaggtcgccgcccaccatggcagcctggccaaggagcag cggctggatgcggagcagcgcctcaagcgcggcgaattgcgcctgctgctggcgaccgct tccctggaactgggcatcgacatcggtgatgtcgacctggtctgccagatcggctcgcca ggctccatcgccgcctttctgcagcgggtcgggcgcgccaatcaccaggtcggcggcctg cccaagggacgactgtttcccacctcgcgcgacgatctggtggaatgcgtcgcgctgctt gattgcgtgcgccggggcgaactggacaccctgcacatcccccaggcaccgctggatgtc ctggcccagcaactggtggccgaggtggcctgccaggagtggtcggagacagcgctgctg gccgtgctacgccaggccgaaccctatgccgctctcgaagaggcggactataccgcggtc gtggagatgctcagccagggctatacggatcgccgcgggccgcgtgccgcctatgtgcac cgggatgcggtcaatggcctgctacgcggtcggcgcggcggcaaggccacggcggtgatg agcggcggcaccatccccgagagtggtgatttcagcgtgctgttggagccccagggccat acggtgggcagcgtcaacgaggatttcgccttcgaaagcctggtaggcgacgtctttcag cttggcaacactgcttaccgcatcatcaagatcgaaggcagcaaggtgcgggtggaagac gccaaggggcagccgcccaacattcccttctggcacggtgaggcgccggggcgcagcgac gagttgtcggcgggcctggcgcggctgcgggcggaactcgaaccgctgctgcccggcacc gacgagccaccggaaccggccatcgcccgcatcggcgcggcctatgagctggaggagggt gccgcccgccagttggtggactatctgggtcgtgcccggcaggcgctgggtgcgctaccg acgcagcagacgctagtgatggagcgcttcttcgaccaggccggcggcatgcagctgatc atccatgccccctttggcagccgcatcaaccgcgcctggggcctggccctgcgcaagaga ttctgccgcaacttcaatgtggagctgcaagcagcagccacggagaacgccctgatcctc tcgctggcgacgagccacagcttcgtgctcgacgaggtctggcgctacctgcatccggcc accgccgagaccgtgctggtccaggccctgctcgatgcgccactgttcgccgtgcgctgg cgctggaacgccaccacggcgctggcgctgccgcgcttcagtgccgggcgcaaggtggct acccaggtgcaacgcatgcgcagcgaagacctcctagccacggtctttcccgaccaggtc gcctgtctggagaatctcgtgggcgagcgtcaggtgccagaccatccactggtccgccag accctggatgactgcctgcacgaatccctcgacagccgcggctggctggccctgctggcg cgcatcaccggtgggcaattgaccctgctgacccgcgatctgcccgggccgtcgccgctg gctgccgaagtactcacggccaagccctatgcctatctggacgacgccccggtcgaggag cggcggacgctggcggtgcagaatcgtcgcttcggcggcgccgatcccgacgagctgggc gccctggatcccgccgccatcgccctggtgcgcgacgaagcctggccacgcctggagacg gcggatgatctgcacgaagccctgctgggtgtgggctttctcaccgaggccgagctgacg cggcaccagtcccaggtccgccagctggtcaaggccggccgagccggttgcctgcggctg ccggaggcgaccctgtggatcgcggccgagcgcctgccgctctttcaggtgctgtttccc gaggcctccacggagccgccgctcagcccgccgcccggattcaaggcgcctgcggatcct gaaacggcactggtggagctcttgcgcgcacgcctcaccgcccttgggccggtggaccag cgtccgttggccgcgagcctcggcctgccgccagagcgcctcaccccggcgctgctggtg ctgcagagcgaaggctacgtcttgcaggggcgctttaccgaggcggacggcgcggtggag tggtgcgagcgccacctgctggcgcgcatccatcgctataccctgggacgcctgcgcaag gccatcgagccggtggcgctggccgactacctgaggttcctgctggagcatcaccatctg gccggtctggcgaccctgaggggcggagaaggcctggaacaggtcatcggcctgctggaa ggcttcgaggtcgccgccgcgggctgggaaggggaggtccttcccagtcgtctaccggat taccagtttacccacctcgatgatctctgccgcgctggccgggtcgtctggctgcgcctg ccgcaacccggacgcggtggcggcggcccggtcaagggctcacccatcgtcctgctgccc cgacgtcatctcgccgactggaacagcctcaccacgcccccgctggccgaggccctgtcg cccaaggggcagcgggtgctggaggtgctcacgcgtcgcggtgcctccttcttcgatgag ctgctcggcgaggcgcgcctcttgcgcagcgagctggaaacggccctgggcgagctggtt ggtatgggcgcggtcaacgccgacagcttcgccggtctgcgcgccctgttgctaccagca gccaagcgcggcagccgcaccggtctgcgccgcgggcgaatgcctctctatggcggcatg gacgacgccgggcgctgggcggccttgcgactggccgagggccctaccgaggagcggttg ccggatgccctgctggagcggttggtctggctgttgctgcgccgctatggcgtgctctgc tggcagctgctgcagcgtgagagcgaggtgttgcccccctggcgcgatcttttgcgcgcc tgccatcgtctggaagcccgtggcgagatccggggcggtcgcttcatcgccggcctgtcc ggcgagcagttcgccgatccggcggccatcgcacccttgcgggaatggcgccagcgcccg ccggaggatctatgggtatgcgtgtcggcgctcgatccgctcaatctggtcggcaccctg ctgccgggcgccaaggtgcctgccgtggctggcaatcgcctgctctatcgcgatggcgta cccatcgccacccgggtaggggcgaaggtcaattggctggtcgagctggaggccggggag caggtgcgggcgcgtcaggctctgcagcaactggggcgggagcgtccccaggtggggctt gggcgcagtctgttgcggcagtag

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