Porphyrobacter sp. LM 6: BG023_111691
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Entry
BG023_111691 CDS
T04468
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG023_111691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porl03019
]
BG023_111691
Enzymes [BR:
porl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BG023_111691
Messenger RNA biogenesis [BR:
porl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BG023_111691
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
UTP25
ResIII
AAA_19
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOL94617
UniProt:
A0A1D7NLK3
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All DBs
Position
1745191..1746762
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AA seq
523 aa
AA seq
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MTTFAELGLSQPVLQALDMKGYTIPTPIQEQAIPPVLKGRDLLGIAQTGTGKTAAFMLPS
IDRLREADKPIPFKSCRMLVLAPTRELAVQIADSAKDYGALAGLKVQCIVGGTSVGKDRN
KLHRGTDILVATPGRLLDLIDQKALNLNGIEVLVLDEADQMLDLGFIHALRKIRELAPKD
RQTLFFSATMPKAIKELVSGYCHNPVQVSVTPESTTAERIDQYLFMVQQDEKTALLEMIL
KRRHQVPGEFERILIFTRTKHGADRVVKKLQQAGIESNAIHGNKSQPQRQRALDEFRKAR
VPILIATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGRDGVAIAFCAEDERA
YLKDIRKTTGAELERLPLPDNFRAVVEGEGPTKPAPRQPMKRVQARPLGQRKPQGDRRPE
GERRPQQGEQRRAEGERRPQGDRRSPQGEQRRAEGDRRPQGERRPQGDRKPQGEKSGQGR
PGGGQRHAGGGRPQGNGGGGNGGRGRGRGRPGGGGGRPRAAQG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacaactttcgctgaactcgggctgtcgcagcccgtgcttcaggccctcgacatgaag
ggctacaccattcccaccccgatccaggaacaggcgatcccgccggttctcaagggccgc
gacctgctgggtatcgcccagaccggcaccggcaagaccgccgctttcatgctccccagc
atcgatcggctgcgcgaggccgacaagccgatcccgttcaagtcctgccgcatgctggtg
ctggccccgacccgcgagctggcggtgcagattgccgacagcgccaaggattacggcgcg
cttgccggcctcaaggtgcagtgcatcgtcggcggcaccagcgtgggcaaggatcgcaac
aagctgcaccgcggcaccgacattctggtcgccacgcccggccgcctgctcgatctgatc
gaccagaaggcactgaacctcaacggcatcgaagtgctggtgctcgacgaggctgaccag
atgctcgatctcggcttcatccacgcgctgcgcaagatccgcgagctcgcgcccaaggat
cgccagacgctgttcttcagcgcaaccatgcccaaggcgatcaaggaactggtgagcggt
tattgccacaatccggtgcaggtctcggttacgccggaaagcacgactgccgagcgcatc
gaccagtatctcttcatggtgcagcaggacgaaaagaccgcgctgctcgaaatgatcctc
aagcgccgccatcaggtgccgggcgagttcgagcgcatcctcatcttcacccgcaccaag
cacggcgcggaccgcgtggtgaagaagttgcagcaggcgggcatcgagagcaacgcgatc
cacggcaacaagtcgcagccgcagcgccagcgcgcgctcgacgagttccgcaaggcgcgt
gtgccgatcctgattgcaaccgatgtggccgcgcgcgggattgatattccgggcgtttcc
cacgtcatcaattacgagctgcccaacgtgcccgaacaatatgtccaccgcatcggccgc
accgcgcgtgcgggccgcgacggggtggcgattgcattctgtgccgaggacgagcgcgcc
tatctcaaggatattcgcaagaccaccggcgccgagcttgagcgtctgccgctgccggac
aatttccgcgccgtggtggaaggcgaaggcccgaccaagcctgccccgcgccagccgatg
aagcgcgtgcaggcgcgccccctcggccagcgcaagccgcaaggcgaccgccggcccgag
ggcgagcgtcgcccgcagcagggcgaacagcgccgcgctgaaggcgagcgtcgcccgcaa
ggggatcgccgttcgccgcagggtgaacagcgacgcgcagaaggcgatcgccgtccgcag
ggcgagcgtcgtccgcagggtgatcgcaagccgcagggcgaaaagtccggccagggtcgt
cccggcggcggccagcgtcatgctggcggcggtcgtccgcaaggcaatggcggcggcggc
aatggtggccgcggacgcggacgcggtcgtcccggtggcggcggcggtcgcccgcgcgcc
gcgcagggctga
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