Porphyromonas sp. oral taxon 275: J4862_06345
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Entry
J4862_06345 CDS
T08761
Name
(GenBank) Smr/MutS family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
porp
Porphyromonas sp. oral taxon 275
Pathway
porp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J4862_06345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porp03400
]
J4862_06345
DNA repair and recombination proteins [BR:
porp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
J4862_06345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
TetR_C_43
AAA_22
DUF5339
Motif
Other DBs
NCBI-ProteinID:
QUB42621
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Position
1589606..1592200
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AA seq
864 aa
AA seq
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MNVQTLDLYPHNYVDKIGFVELRQLLAAHCASSLGRERMLSLEASADYERISLELEETRE
MMQLLTSEHQLPSLQIVDCREALHRIRPQGTYVEELELQDLLRMLETLHALHRFFTEEQS
TGERADESLVYLYPRLTALLEDRPTFPKVEQHLRSLLTEEGRLRDNASRELLQIRRTLAE
TERSLSGMLQRILTGARREGWVEQDVQPALRDGRLVIPVSPMHKRKIRGIVHDESATGKT
VYIEPVELVEANNRIRELESEERREVIRILTEVANRLRPNLRHLLESYELLATYDFVYAK
AHWALELGAQCPRLSPEPRLEWYGARHPLLQRSLSASGRSIVPLDITLQAPDARILLISG
PNAGGKSVCLKTVGLLQYLLQCGLPIPVQDHSEAGIFERLYIDIGDEQSIDDDLSTYSSH
LRNMKHFVRHADRASLLLIDEFGGGTEPTIGGAIAQALLHRFNDQGAFGVITTHYQNLKT
YAEDHPGLINGAMLYDRHEMRPLFRLSIGRPGSSFAIEIARKIGLPEDVIAEVSEQVGSE
YIDMDKYLQDIIRDKRYWETKRQSIRQDERALQEARQRFDEGTEHLKSERKKILEEARRE
AARIIQEAGGRIERTIREIREAEAAKDQTRLIRQQLTEYKEGLSAEEEALQLAAAKKTQR
EVERLLARRERRAKGKTQPKEQPRLAALVTDTEREAVASHSVLGEISVGSTVRIEGQKAL
GQVLSLSDREAVVALGALKTTVPLSRLQLATKGEAGRLKHQQHQQPIQPQASSIIDQIHQ
KRLHFRHELDVRGFRAGEALDAVGYYVDEALQLGVGQVRILHGTGTGALREAIRSYLGGV
RGVANFHDEDVRFGGAGITVVHME
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtccagacactagacctatatccccataactacgtcgacaagatcggcttcgta
gagctgcgccagctgctggctgcccactgcgcctcctcgctagggcgcgagcgcatgctc
tccctagaggcctctgccgactacgagcgtatctccctcgagctggaggagacgcgcgag
atgatgcagctcctcacgagcgagcaccagctgcccagcctccagatcgtggactgccgc
gaggcgctccaccgcatacgccctcagggcacctatgtcgaggagctggagctgcaggac
ctgctacgcatgctggagacgctgcacgccctgcaccgattcttcaccgaggagcagagc
acgggggagcgcgccgatgagagcctcgtctacctctacccccgccttacggcgctgctc
gaggaccgacctaccttccccaaggtcgagcagcatctgaggagcctcctgaccgaggaa
ggacgcctgagagacaatgcctcgcgcgagctgctgcagatacgccgcacgctcgccgag
accgagcgcagcctctcgggcatgctgcagcgcatcctcacaggcgcccgccgcgaaggc
tgggtggagcaggacgtgcagcccgccctacgtgatgggcgcctcgtgatccccgtcagc
ccgatgcacaagcgtaagattcgcggcatcgtccacgatgagtccgccacggggaagacc
gtctacatcgagcccgtagagctcgtcgaggccaacaaccgtatccgcgagctggagagc
gaggagcgtcgcgaggtcatccgcatccttaccgaggtggccaatagactacgccccaac
ctccgccacctgctggagagctacgagctgctggcgacctacgacttcgtctatgccaag
gcgcactgggcgctggagctgggggcgcagtgtccgcgccttagccccgagccgcgtctg
gaatggtacggcgcacgccaccccctgctgcagcgctcgctcagcgcctcggggcggagc
atcgtccccctagacatcacgctccaggcccccgatgcgcgtatcctcctgatctcgggg
cccaacgctgggggtaagtccgtatgcctcaagaccgtgggcctactgcagtacctccta
cagtgcgggctgcccatccccgtgcaggatcactccgaggcagggatcttcgagcggctc
tacatcgacatcggcgacgagcagagcatagatgacgacctcagcacctatagctcgcac
ctgaggaacatgaagcacttcgtgcgccacgccgaccgtgcgagcctgctgctaatcgac
gaattcggcggcggcaccgagcccaccataggcggcgccatagctcaggcgctgctgcac
cgcttcaatgaccaaggggccttcggcgtcatcacgacgcactaccagaacctcaagacc
tacgccgaggaccatcccgggctcatcaacggcgccatgctctacgaccgccacgagatg
cgccccctcttccgcctctccattgggcgcccggggagctccttcgccatcgagatcgcc
cgcaagatcggcctccccgaggacgtcatcgccgaggtctccgagcaggtaggcagcgag
tacatcgacatggataagtacctgcaggacattatccgcgacaagcgctactgggagacc
aagcgccagagcatacgtcaggacgagcgcgcgctgcaggaggcacgacagcgcttcgac
gagggtaccgagcacctcaagagcgagcgcaagaagatcctcgaggaggcacgccgcgag
gcagcccgcatcatccaggaggcgggcggacgcatcgagcgcaccatccgcgagatccgt
gaggccgaggccgccaaggaccagacacgcctcatccgccagcagctcaccgagtacaag
gaggggctatcggctgaggaagaagccctgcagctagctgcggccaagaagacgcagcga
gaggtggagcgcctcttggcgcgccgtgagcgtcgtgccaagggcaagacccagcccaag
gagcagcctcgcctggccgccctcgtcaccgacaccgagcgcgaggccgtcgctagccat
agcgtgctgggggagatcagcgtcggcagcaccgtccgtatcgagggacagaaagcgctg
gggcaggtcctctcgctcagcgaccgtgaggccgtcgtcgccctcggcgcgctcaagacc
accgtcccgctgagccgcctgcagctcgccaccaagggcgaggcagggcgtctcaagcac
cagcagcatcagcagcccatacagccgcaggcctcgagcatcatcgaccagatccatcag
aagcgcttgcacttccgccacgagctggatgtgcgcggcttccgagctggtgaggcgctg
gatgccgtaggctactacgtcgacgaggccctgcagctcggggtcgggcaggtacgtatc
ctgcacggcacgggcacgggggcgctacgcgaggccatacgcagctacctcggcggtgtg
cgtggcgtggcgaacttccacgacgaagatgtacgcttcggcggggcaggcattaccgtc
gtccacatggagtag
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