Pseudomonas oryziphila: EJA05_01685
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Entry
EJA05_01685 CDS
T07791
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
pory
Pseudomonas oryziphila
Pathway
pory00260
Glycine, serine and threonine metabolism
pory01100
Metabolic pathways
Module
pory_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EJA05_01685 (dgcB)
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Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_8
Fer4_10
Fer4_17
Fer4_9
Fer4_16
Fer4_2
Fer4
Fer4_6
Fer4_7
Fer4_21
Fer4_4
12TM_1
OPT
Fer4_22
Bax1-I
Motif
Other DBs
NCBI-ProteinID:
AZL66527
UniProt:
A0A3S8UE08
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All DBs
Position
337378..339330
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AA seq
650 aa
AA seq
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MLNTLLPILLFTALALAVLGALRRVRMWRRGRPSQVDLIKGLLAMPRRYLVDLHHVVERD
KYMSKTHVATAGGFVLSAVLAILVHGFGLQSKILGYALLVATVIMFTGALFVFKRRLNPP
SRLSKGPWMRLPKSLLMFAASFFIATLPVAGILPQGTGGWVLVAVLGVGVLWGVSELFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLEDPNAPLGVEKPVDFTWNQLL
GFDACVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIGLAGGTDATFAGSPYPGKPIGEHGG
HPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LDNLIATDNPGGFAPGGRMNWAADLNLQLLSDVKRTEVLFWVGDGAFDMRNQRTLRAFVK
VLKASGVDFAVLGLEERDSGDVARRLGDEATFQHLAKRNIQTLAKYQFQRIVTCDPHSFH
VLKNEYGALGGDYQVQHHSTYIAELIAAGKLNLGQHKGGSVTYHDPCYLGRYNGEYEAPR
DVLKALGIEVREMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMDDIRETEAELVAVGC
PQCTAMLEGVVEPRPQIKDLAELVADVLIEDEAPASAKSPASKREPAEVH
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacacccttctacccatcctgctgttcaccgcgctggccctggcggtgctcggc
gccctgcgccgggtgcgcatgtggcggcgcgggcggccgagccaggtcgacctgatcaaa
ggcctgctggccatgccacggcgctacctggtggacctgcaccacgtggtcgagcgcgac
aagtacatgtccaagacccacgtggccactgccggcggcttcgtgctctcggccgtgctg
gcgatcctggtgcacggcttcggcctgcagagcaagatactcggctatgccctgctggtg
gccacggtgatcatgttcaccggtgccctgttcgtcttcaaacgccgcctcaacccgcct
tcgcgcctgtccaagggcccgtggatgcgcctgcccaagagcctgctgatgttcgcggcg
agcttcttcatcgccacgctgccggtggccggcatcctgccgcaaggcaccggtggctgg
gtgctggtggcggtgctgggcgtcggagtgctgtggggcgtgtccgagctgttcttcggc
atgacctggggcgggccgatgaagcacgccttcgccggcgccctgcacctggcctggcac
cgccgcgccgagcgcttcggcggcggccgttccaccggcctcaagccgctggacctggaa
gacccgaacgcgccgctgggcgtggaaaaaccggtggacttcacctggaaccagctgctc
ggtttcgacgcctgcgtgcaatgcggcaagtgcgaagccatgtgcccggcgttcgccgcc
ggccagccgctgaacccgaaaaagctcattcaggacatggtcatcggcctggccggtggc
accgacgccaccttcgccggcagcccctatccgggcaagccgatcggtgagcatggcggc
catccgcaccagccgatcgtcaacggcctggtcgatgccgaaaccctgtggtcgtgcacg
acctgccgcgcttgcgtggaggagtgcccgatgatgatcgagcacgtcgatgccatcgtc
gacatgcgccgccacctcaccctggaaaagggcgccaccccgaacaagggcgccgaggta
ctggacaacctgatcgccaccgacaaccccggcggtttcgcccccggcgggcggatgaac
tgggcggccgacctcaacctgcaactgctcagtgatgtgaagcgcaccgaagtgctgttc
tgggtgggcgatggcgccttcgacatgcgcaaccagcgcacgctgcgcgccttcgtcaaa
gtgctcaaggcctccggcgtggacttcgccgtgcttggcctggaagagcgcgacagcggt
gacgtggcccgtcgcctgggcgatgaagcgaccttccagcacctggccaaacgcaatatc
cagaccctggccaagtaccagttccagcgcatcgtcacttgcgatccgcacagcttccat
gtgctgaagaatgaatacggcgcccttggcggcgactaccaggtgcagcaccacagcacc
tacatcgccgaactgatcgccgccggcaagctcaaccttggccagcacaagggtggcagc
gtcacctaccacgacccgtgctacctgggccgttacaacggcgagtacgaggccccgcgc
gacgtgctcaaggccttgggtatcgaagtgcgcgagatgcagcgttcgggcttccgttcc
cgttgctgcggcggtggcggcggcgcgccgatcaccgacattccgggcaagcaacgtatc
cccgacatgcgcatggacgatatccgcgagaccgaggccgagctggtggccgtgggttgc
ccacagtgcacggcgatgctcgaaggcgtggtcgaaccacggccacagatcaaggacctg
gccgagttggtcgccgatgtgctgatcgaagacgaagccccggcgagcgccaagtcgcca
gccagcaaacgtgaacctgcggaggtgcactga
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