Polaromonas sp. SP1: DT070_03695
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Entry
DT070_03695 CDS
T05689
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos00521
Streptomycin biosynthesis
pos00523
Polyketide sugar unit biosynthesis
pos00525
Acarbose and validamycin biosynthesis
pos00541
O-Antigen nucleotide sugar biosynthesis
pos01100
Metabolic pathways
pos01110
Biosynthesis of secondary metabolites
pos01250
Biosynthesis of nucleotide sugars
Module
pos_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DT070_03695 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DT070_03695 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DT070_03695 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DT070_03695 (rfbB)
00525 Acarbose and validamycin biosynthesis
DT070_03695 (rfbB)
Enzymes [BR:
pos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DT070_03695 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
AYQ30353
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Position
complement(780146..781210)
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AA seq
354 aa
AA seq
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MILVTGGAGFIGANFVLDWLAGTDEPVVNLDKLTYAGNMETLDPLKGDPRHIFVRGEIGD
SALVADLLARHKPRAIVHFAAESHVDRSIADPEEFIQTNIVGTFRLLEAARQFWNGLPAG
EKGAFRFLQVSTDEVYGSLQPADPAFSETNRYEPNSPYSASKAASDHLARAYHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGQQVRDWLYVKDHCSGIRRVLEA
GKPGETYNIGGCNEKPNLDIVHAVCALLDELRPRSSGSYREQVAFIKDRPGHDRRYAIDA
GKIMQELGWKPAETFETGIRKTVQWYLDNPEWVNHVQSGAYRDWVEAQYAATSS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgattttggttacagggggagccggatttatcggcgccaactttgtcctcgactggctg
gcgggcaccgacgagccggtcgtcaacctggacaaactcacctatgcgggcaatatggaa
accctggaccccctgaagggtgatccacggcatatttttgtccggggcgagatcggcgac
agcgccctggtcgcggacttgttggcccggcacaaacctcgcgcgatcgttcactttgca
gccgagtcgcatgtagaccggtcgattgcggaccctgaagaattcatccagaccaacatc
gtcggcacctttcgcttgctggaagcagcgcgccagttctggaacggcctgcctgccggc
gagaagggcgcgtttcgtttcctccaggtctctaccgatgaggtttatggctccttgcag
cctgccgacccggcctttagcgagaccaaccggtatgagccgaacagtccctattcggcc
agcaaggctgccagcgaccatctggcccgggcctatcaccacacctacggcctgccagtg
ctcaccaccaactgctccaacaattacgggccctaccacttccctgaaaagctgattccg
ctcatgatcgtcaacgcccttgccggcaagcccctgccggtctatggcgacggccagcag
gtgcgcgactggttgtacgtcaaagaccactgcagcggcattcgccgcgtgctcgaagcc
gggaaacccggcgagacctacaacatcggcggctgcaacgaaaaaccgaatctcgacatc
gtccatgcggtttgcgcgttgctcgatgaactgcgcccacgcagcagtggcagctaccgc
gaacaggtggccttcatcaaggacaggcccggccatgatcgccgttacgcgattgatgcc
ggcaagatcatgcaggagcttgggtggaagcctgctgaaactttcgaaaccggcattcgc
aagaccgtccagtggtacctggacaatcctgaatgggttaaccatgtacagagcggtgcc
tatcgtgattgggtcgaggcccaatatgcggcgacctcatcctga
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