Polaromonas sp. SP1: DT070_09870
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Entry
DT070_09870 CDS
T05689
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pos03400
]
DT070_09870
Enzymes [BR:
pos01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
DT070_09870
DNA repair and recombination proteins [BR:
pos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
DT070_09870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AYQ28298
LinkDB
All DBs
Position
complement(2090544..2092112)
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AA seq
522 aa
AA seq
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MNLPAPPAPIRHLVIVLGDQLDQASSALEDFDVGQDVVWMAEVEAESTHVWSSRQRIALF
LSAMRHFAQWLSSQAYAVSYTGLDDLGNLGALDLELAHAIDRLQPQALVMCAPGDWRVLQ
LIKSVASTKKLPLALRDDRHFFSTVREFAAHAAQRKQLRLEYWYRELRQKHGILMQGDKP
LGDQWNFDADNRKSFGKAGPPQLTPPTRFAPDATTREVMALVNRKFSGHPGKLEAFGWPV
TREEALVALREFIAQRLPLFGDYEDAMWSGEAWLYHSHLSSALNLKLLGAREVVAAAEEA
LRLGLAPLAAVEGFIRQILGWREYVRGIYWTQMPGYLERNALGAQRALPGWYWTGETSMA
CLRDVITQTLEHGYAHHIQRLMVAGLYALLLGVDPKAVHGWYLSVYVDAVEWVELPNTLG
MSQFGDGGLMASKPYVASGKYIQRMSNYCKGCQYDPAESTGPKACPYTTLYWDFLMRHEK
LLEKNQRMAMQLKNLSRMDATARQAIQEAADHHRQANLRPGN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaacctccctgcaccgccggcacctatccgtcacctggtgattgttttgggagaccag
ctcgatcaggcctcgtcagcccttgaagattttgacgttggccaggatgtcgtctggatg
gcggaagtggaggcggaatccacccatgtgtggtcttccaggcaacgcattgccttgttc
ctgagcgccatgcggcatttcgcgcaatggttgagctcacaggcttatgcggtcagctac
accgggctggacgacctaggcaacctgggcgcgctggatcttgaactggcccacgccatt
gaccgcctgcaaccgcaggccttggtcatgtgcgcacctggcgactggcgggtacttcag
ctcatcaagtctgtcgcgtccacaaaaaagttgcccctggcactgcgcgatgaccggcat
tttttcagcacggtgcgggagtttgccgcgcatgccgcccaacgcaagcagcttcgcctc
gaatactggtaccgggagctgcggcaaaagcacggcattctgatgcagggcgataaaccc
ctcggtgaccagtggaactttgatgcggacaaccgcaaatcctttggcaaggcggggccg
ccgcagctcaccccacctacccgctttgcccccgacgcaaccacgcgggaggtgatggcg
ctggtcaaccgaaaattctccggccaccccggcaagcttgaagcgtttggctggcccgtg
acacgggaagaagcgctggtcgccctgcgggagttcatcgcccagcgcctgcccctcttc
ggagactacgaagacgccatgtggtcgggcgaggcctggctctatcactcgcacctgagc
agcgcgctgaacctcaagctgctgggcgccagggaagtggtggcggctgcagaagaggct
ttgcgcctcggcctggcgcctcttgcagcggtggaaggttttatccggcagatactgggc
tggcgcgaatacgtgcgcggcatctactggacgcagatgcccggctatcttgagagaaat
gcactgggtgcgcagcgtgcgctccccggttggtactggacgggcgaaaccagcatggcc
tgtctgcgcgacgtgatcacccagacgctggagcacggctacgcgcaccatatccagcga
ttgatggtggccggcctctatgccctgctgctgggggtggacccgaaagcagttcacggc
tggtacctcagcgtctatgtggatgctgtggaatgggtggagctgccgaacacgctgggc
atgagccagtttggcgacggcggcctgatggcgagcaagccgtatgtggcaagcggcaaa
tacattcagcgcatgagcaactactgcaaaggctgccaatacgacccggccgaatccacc
ggccccaaagcctgcccgtacaccacgctgtattgggactttttgatgcggcatgaaaag
ctgctcgagaaaaaccagcgcatggccatgcagctgaagaacctgtcccggatggatgcc
acggccaggcaagccatccaggaggcggccgaccatcaccggcaggccaatttgcgaccc
ggcaactga
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