Porphyrobacter sp. YT40: E2E27_05640
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Entry
E2E27_05640 CDS
T06153
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00521
Streptomycin biosynthesis
pot00523
Polyketide sugar unit biosynthesis
pot00541
O-Antigen nucleotide sugar biosynthesis
pot01100
Metabolic pathways
pot01110
Biosynthesis of secondary metabolites
pot01250
Biosynthesis of nucleotide sugars
Module
pot_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
E2E27_05640 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E2E27_05640 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E2E27_05640 (rfbC)
Enzymes [BR:
pot01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
E2E27_05640 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QDH33863
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Position
1192497..1193165
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AA seq
222 aa
AA seq
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MAAGLHHRRTPARDCRAAEKVGLWRISLEPARQPVDRAGAAVNIIETALPGVLIIEPRVF
GDARGFFMETWNAAAFAGAGLDLTFVQDNHSRSQKGVLRGLHFQNPGPQGKLVRVANGAV
FDVAVDLRAASPTFGQWAGVELSAANKRMFWVPEGFAHGFLTLEDDTDFLYKCTAPYAPQ
SEHTLAWDDPAVGIEWPSLGADPLISEKDAHGLSLAQVQVFV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagggcttcatcaccgccgaacgcctgcgcgagattgccgcgccgctgagaaa
gtcgggctatggcgaatatctcttgaacctgctcgacaacccgtcgaccgggccggtgct
gccgtgaacatcatcgaaaccgcgcttcccggtgtgctgatcatcgaaccacgcgtgttc
ggcgatgcgcggggcttcttcatggaaacgtggaatgccgccgcctttgccggagccggg
ctggatctgaccttcgtgcaggacaatcacagccgctcgcagaagggcgtgctgcggggg
ctgcacttccagaatccggggccgcagggcaagctggtgcgggtggcgaacggcgcggtg
ttcgatgtcgcggtcgatctgcgcgccgcctcgccgacctttggccaatgggccggggtc
gaactcagcgcggcgaataagcggatgttctgggtgcccgagggcttcgcgcacggcttc
ctcacgctcgaggacgataccgatttcctctacaagtgcaccgcgccctatgcgccgcag
agcgagcacacgctggcgtgggacgatccggcggtggggatcgaatggccctcacttggc
gctgatccgctgatttcggaaaaggacgcgcacgggctctcgctggcgcaggtgcaggtg
tttgtatga
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