Penicillium oxalicum: POX_b02208
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Entry
POX_b02208 CDS
T09521
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
pou
Penicillium oxalicum
Pathway
pou03013
Nucleocytoplasmic transport
pou03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
POX_b02208
09122 Translation
03013 Nucleocytoplasmic transport
POX_b02208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pou03019
]
POX_b02208
03041 Spliceosome [BR:
pou03041
]
POX_b02208
Messenger RNA biogenesis [BR:
pou03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
POX_b02208
Spliceosome [BR:
pou03041
]
Complex C
Other components
EJC/TREX
POX_b02208
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
POX_b02208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
74434527
NCBI-ProteinID:
XP_049971468
LinkDB
All DBs
Position
II:904673..906994
Genome browser
AA seq
704 aa
AA seq
DB search
MAALDLQVVRVYKELVDRLLKRAAEVKADSQIEPPLTEGILGESIWKLSAEDDEAVSHFN
SQTRFAAVEIAFREKFYRILASTPIHDSTFIQIWNLLDIVSIFSDNEQCEPGLIFWLIEE
LLDSQTIDGCRKVFDYLESRRERNIKKHFKQKSLVILRSCNELLRRLSRAEDTVFCGRVF
IFLFQSFPLGDKSSVNLRGEFHTENVTTFDDVVKPSPEAEEDTVMADENDNASPTETDAG
PGDQPDGPSPIPKVVFSEEKSGMNGQMKGKVDLDALYPVFWSLQAYFSSPSQLFDSERFA
AFKSGLEATVAAFKNMKTELENKAGSRSSEEARKSHRRKRVAEDAEVGISFNPKYLTSRD
LFDLEVSDTAFRRHVLVQALILIDFMLSLTPKAKSRLVDATNKSVLYGFDMNEEDAKWAA
DMRKSIEGYLRQGDGGNFYFRMVDTVLSRDKNWVRWKAEGCPPIERPAVSVSDYMSAREH
ATKAYANKRIRPSPMGSLDLKFLSDSEALANIERLKESDRVTIPSADSLMMGIMDDEMDI
DTAQTPDDKALAEKAKSSKTWRLLRLSVKTKLGRFDKFKDGENLNALFETPEAPSETPQP
VEGSQPPEEKTVPTLTPSIEAPSGGGGDEVKVEEAREGSGPVTVESATTIADANQLNDVP
SEPAPVPETTTVLAEGNSTDSPGPAATTGTAPEKTTEEEPTTAT
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactagacctccaggtagtgcgtgtctacaaggagctagttgaccgtctgttg
aagcgcgcagcagaggtcaaagctgactcgcagatcgagccaccgctgactgaagggatc
ctgggagagtcaatctggaagctttctgctgaagacgacgaggcagtcagtcatttcaac
tcacagactcgtttcgctgctgtggagatcgcctttcgcgaaaaattctatcgcattctg
gcttcgactccgattcacgattcgacatttatccagatctggaacttactggatatcgtc
tccatcttctcggacaatgaacaatgtgaacctggcttgattttctggctgatcgaagag
cttctcgacagtcaaacaatcgacggatgtcgaaaggtttttgactacctagaatcgcgc
cgggagcgtaatatcaagaaacatttcaagcaaaaaagtctcgtcattctccgctcgtgc
aacgagcttcttcgacggctgtctcgcgcggaagacacggtgttctgcggtcgtgttttc
atcttcctgttccagagcttcccactaggcgacaagagctcagtcaacctgcggggcgag
ttccacaccgagaacgtgactacgttcgacgatgttgtaaagccgtcgcccgaggccgag
gaagacactgtcatggcagatgagaacgacaatgcttcgcctacggaaaccgatgccggt
ccaggggaccaaccagatgggccttcaccaatcccgaaagtggtcttcagcgaggagaag
agcggaatgaatggtcagatgaaggggaaagttgacttggatgccctctatccagttttc
tggagtcttcaagcatacttttcttcccccagccaattgttcgattccgagcgattcgct
gccttcaaatccggtctggaagctaccgttgccgcatttaaaaacatgaagactgagttg
gagaacaaagccgggtcaaggtcttccgaggaggctcgcaagtctcacaggcggaaacgt
gtcgctgaagacgccgaagttggcatcagcttcaatccgaaatacctgactagccgggat
ctctttgaccttgaagtgagcgacacggcattcagaaggcatgtcctggtacaagcactc
atcctcattgactttatgctatccctcacacccaaagccaagtctcgattggtcgatgcg
accaacaagtctgtgctgtacggctttgatatgaatgaagaagacgccaaatgggcagcc
gacatgcgcaagagtattgagggatatttacgccagggcgatggtggaaacttttatttc
cgaatggtagatacggtcttatccagagataaaaattgggtccgttggaaggccgagggg
tgtccacccattgagcggccggctgtctcggtgtccgactacatgagcgcccgcgagcat
gccacgaaagcatatgcaaacaagcggattcgtccgtcccccatggggtcacttgacttg
aaattcctatctgacagtgaggccctcgccaatattgagcggctgaaggaatctgataga
gtcaccatcccatccgcagactctctgatgatgggcatcatggacgatgagatggacatc
gacaccgcgcagaccccagacgacaaggcccttgcggaaaaggccaaatcaagcaagacg
tggcgtcttctccgtctgtccgtgaagaccaaactcggccgcttcgacaaattcaaagat
ggagagaatttgaatgcccttttcgagacacccgaggcaccatcagagaccccgcagccg
gtcgaaggaagccaaccaccagaggagaagactgtcccgacacttacgccttctatcgag
gctccctctggtggtggtggtgacgaagtgaaagtagaagaggctagggagggttctggt
cctgtcacggttgaaagtgccaccaccatcgcagacgccaatcagctgaatgatgttccc
tccgagccagcccctgttccagagacgacgactgtgctcgctgagggcaactcgaccgat
tcacccgggccagctgcgaccactgggacggctcccgagaaaactacagaagaggagcca
acaacagccacctag
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