Paralichthys olivaceus (Japanese flounder): 109624033
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Entry
109624033 CDS
T06037
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
109624033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pov04040
]
109624033
Ion channels [BR:
pov04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109624033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
109624033
NCBI-ProteinID:
XP_019934091
LinkDB
All DBs
Position
Unknown
AA seq
1494 aa
AA seq
DB search
MSPDLPCSQAQTGVLGWLSNGFVSTLPQPSNSPRLSRANDSRVSTEDGERSGVIGWVAQG
LTKVLPQPDDKYRETNNEEHTEIYDVETMPDFDPLPHIPVVEMVSDDEEAEAESLTPQFP
PNVVKWIKEIIPQPVILPPGAVAIEQSTKSSRSRSSLDKILSPPPESLSGISLDTDSKVS
NVVGWFMSGIGLKLPQPAIPPKDDIQCAAEVLQKASSNLKPDMVLEDVESDNEGQHRPAP
PSTSMTPASPTTHQQQDAMQQTQCSSQPAASMPSQMHPDANPVPGGLSENMTKISQEDAE
TQTGRWTPFIESIKREAEDVAFATMEERLLMERMEMTRVAEEVARQTAEMAIRQMASEGQ
SIRLSLDSAQLLEEPDAEEEESLAEDEEELEEAVLPTLIEPEPKEDAEPQQTSPSPPPSP
EPVKILEPEPNPEPEPEPEPEPEPEPEPEPEPEPEAVTKTQEANSNAQPVTQQPQKAEPD
GQVTDADKPAEKEEEDAGDDCGVPVSCDTFKSCLMRIPHTSECLGNINAFFKENGISPPK
IPSMPKLPTQFSDVTKSSPSSPAGRSSTSATSGTASTALCLKMPKKQQQQKQTKDKNQQD
VELNRLARHSPLPPPHHPHLRSRSPSPSSPNGSTLELPNVPSYPRLPPIVSPPSKQLNAT
SRQLSGLSNPAFFIEEDSDISPVRPSESSSLSLRPAVNVEDVDSDHEKKGGEGGGEGEEQ
SAVPKILTPQDPKLTTLTVPVTPSGGRQSKGDKDSGRNHRTIWTKIRKLHSQSEDDDDEV
NLPVRAWPSQSSLHSTEDVLPERPASSASQTSTVVNERLQELVRMFKERTEKAKEKLIDP
DSSDEDSIIPSPPQPAPAGQPLDRGEKEAQAGPSGAEAGGRVESEAEEERTRGCCSGKAP
RCIHACVHYRFPASIDPFTNQMYVLWMFLVSLAWNWNAWFIPVRWAFPYQTPDNIYYWLL
TDYLCDLIYILDITIFQPRLQFVRGGDIVSDKKDMRKNYMKTKRFKFDVASLVPLELFYF
KTGINPLLRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTTTYLLYCLHCNACLYYWCS
AFTGLGSTKWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTLFEIVFQLINYFVGVFAFS
IMIGQMRDVVGAATAGQTYYRTCMDNTIKYMSSYRIPKDVQNRVKTWYNYTWQSQGMLDE
QELLTQLPDKMRLDIAIDVNYSIVSKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKG
EVGREMYIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLSVGGGNRRTANVIAHGFAN
LFILDKKDLNEILVHYPESKKLLRKKARKMLTKGKKPEPKEEAKEAPQAPVAAVRPETPK
LLRAALEMTEKSSGLKGALAEVKERTKSFISLQPPLSPTSSSGPDRDGDTPSPIFASSAT
PRSASRCHSNVSLGPHSASQCHSHPDETLAMDQSEEDVCEDEGNEAEKRKGCRS
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgacctcccctgcagtcaggcccagactggagtattaggctggctgtctaat
gggttcgtcagcactctgccgcagccgtctaactcccctcgactcagcagggccaatgac
tccagggtgagtacagaagatggagaaaggtctggagtgatcggctgggtcgctcagggt
ctgaccaaggttctgcctcagcccgatgacaagtacagagagaccaacaacgaggaacac
actgagatctatgatgttgaaacaatgccagatttcgatcccctcccacacatcccagtg
gtggagatggtgtcagatgacgaggaagcagaagcagaaagtctgacccctcagttccct
ccaaatgtggtgaaatggataaaggagatcatccctcagccagttatactgccccctggt
gctgtagccatagaacaatcgaccaagtcatcccgctcccgctcctctctggacaaaatt
ctgtctccaccacctgaatctctcagtggaatctcactcgataccgacagcaaagtgtcc
aatgtggtcggctggttcatgtccggtattggcctgaagctgcctcagcctgcgattccc
cccaaagacgatatccagtgtgcagctgaagttctacagaaagcttcttccaatctcaaa
cctgacatggtcctagaagatgtggagtcagacaacgagggtcagcacagacctgctcca
ccgtccacatcaatgactcctgcatcaccgacaactcaccaacagcaggacgccatgcag
cagacgcagtgcagttcacagcccgcggcctccatgccgtcccagatgcaccctgatgcc
aatccagtgccaggaggactttcagagaacatgacgaaaatatctcaggaagatgccgag
actcagacgggtcgctggacgccgtttatcgagagcatcaagagggaggctgaagatgtg
gcctttgctaccatggaggaacgtctgctgatggagcgcatggagatgacccgtgtggct
gaggaggtggccaggcagacggcggagatggccatcagacagatggccagtgagggacag
tccatcaggctctcgctggacagtgcacaactgctggaggagcctgacgcagaagaggaa
gagagtcttgcagaggacgaggaagagctagaagaggctgtgttaccgaccttaatagaa
ccagagccaaaggaggacgcagagccacagcagacgtccccctccccacctccaagtcct
gaaccagttaagatccttgaaccagagccgaatcctgaacctgaaccagaacctgaacca
gaacctgaacctgaaccagaacctgaacctgaacctgaaccagaagcagtgaccaagacc
caggaggccaactctaacgctcagcctgtgacacagcagccacagaaagcagagccagac
ggacaagtcactgacgctgacaaacctgcagaaaaagaggaggaagatgccggggatgac
tgtggtgttccagtcagctgtgatacatttaagagctgcctgatgcgcatccctcacacc
tccgagtgcctcggcaatatcaacgcattcttcaaagagaacggcatctcccccccgaaa
ataccctccatgcccaagctacccacccagttctctgatgtgaccaaaagctctcccagt
tccccagccggacgcagcagtacttcagcaacgtccggaaccgcctcaacagccttatgc
ctcaagatgcctaagaaacaacaacagcaaaaacagacgaaagacaagaaccagcaagac
gtagaacttaaccggctcgcccgacactcccctctccctcctcctcaccatcctcacctc
cgatcccgctccccgtctccatcatcccccaatggtagcaccctcgagttgcccaatgtg
ccatcctatccacgcctgccaccgattgtcagccccccgtcaaagcagctcaacgccaca
tcccgccagctgtctggtctgtccaacccggcattcttcatcgaagaggactcagacatt
tcgccagtcagaccctcagagagctccagcctcagcctacgtccagccgtcaatgtcgag
gatgtggactcagaccacgagaaaaaaggaggagaaggaggaggagaaggggaggaacag
agtgctgtccctaaaatactcaccccacaggatccgaaacttacaaccctcactgtccct
gtgaccccatctggaggtcgtcagagtaaaggagataaagatagtggaaggaatcacagg
actatctggacaaagatcaggaagcttcactctcaaagtgaagatgatgatgatgaagta
aacctcccagtcagagcctggcccagccagtccagcctgcacagcacagaggatgttctg
ccagaacgtccggcgtcctcagccagtcagaccagcacagtggtgaatgagcgtttgcag
gagctggtgcggatgtttaaagagagaacagagaaggccaaggagaaactgattgaccct
gacagctcagacgaagacagcatcatcccctcacctcctcagcctgctcctgcagggcag
ccgctggacaggggagagaaggaggcacaggcaggtccatcaggagcagaagcaggagga
agagtggagagtgaggcagaggaggagcggacgaggggctgctgcagtgggaaagctcct
cggtgcattcatgcctgtgtgcactatcgtttccctgccagcatcgaccccttcaccaac
cagatgtatgtgctgtggatgttcttggtttctcttgcgtggaactggaatgcatggttc
atccctgtgcgctgggccttcccctatcagactccggacaatatttactactggctgctg
accgactacctgtgtgacctcatctacatcctggacatcaccatcttccagccacgcctg
cagtttgttcgcggaggggacatcgtgagcgacaaaaaagacatgagaaagaattacatg
aaaaccaaacgcttcaagtttgatgttgccagcctcgttcccctggagctcttctatttc
aagactggcatcaaccccctgctccgtttaccacggctgctgaagatcaactccttcttc
gagttcaatgagcgtctggaggccatcttgactaaagcctacatatacagggtgatccgt
accaccacatatcttctgtattgtctccactgtaacgcctgtctctactactggtgctct
gcctttacaggactgggttccactaagtgggtgtacaatggaaagggcaacagttacatt
cgctgttactactttgcggtgaagaccctgatcaccatcggaggtctaccagaccccacc
accctgtttgagatcgtctttcaacttatcaactactttgttggagtctttgccttctct
atcatgataggacagatgcgtgatgtggttggtgcagccacagcgggtcagacctactac
cgcacatgtatggacaacactattaaatacatgtcgtcataccgcatccctaaagacgtc
cagaaccgcgtgaagacgtggtacaactacacctggcaatctcaaggcatgctggacgag
caggagctgctgactcagctgccagataaaatgcgtctggacattgctattgacgtcaac
tactccatcgtgagcaaagtcccactgttccagggttgtgacagacagatgatctttgat
atgctgaaaagccttcgctctgtcgtctacctgccgggagactacgtctgcaaaaagggg
gaggtggggcgggagatgtacatcattaaagcgggggaggtgcaggtggttgggggacct
gatgggaagacggtgttcgtcactctcagagcaggatcagtgtttggagagatcagtttg
ctttcagtaggcgggggaaataggcgcacagccaatgtgattgctcatggttttgccaat
ctcttcatcctggacaagaaagacctgaacgagatcctggtccactaccccgagtccaag
aaactgctccgcaagaaggccaggaagatgctgaccaagggaaagaaacctgagcccaaa
gaagaggctaaggaagcacctcaggctccggtagctgccgtcaggccggagactcccaaa
ctgctgagagccgccctggagatgacagagaagtcgtctggactgaaaggagctctggct
gaagtcaaagagaggaccaagtcctttatatcattacagcctcctctgtctcccacctcc
agctctggacccgacagagacggggacacaccctcaccaatctttgccagctcagcgaca
cctcgctctgcttcccgctgccatagcaacgtctccttggggcctcactctgcatcacag
tgccacagccaccctgacgaaacactcgccatggaccaaagcgaggaggacgtctgtgag
gacgaagggaacgaggctgaaaagaggaaagggtgtaggagttag
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