Paralichthys olivaceus (Japanese flounder): 109626306
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Entry
109626306 CDS
T06037
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109626306 (chd1)
03036 Chromosome and associated proteins [BR:
pov03036
]
109626306 (chd1)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109626306 (chd1)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
109626306 (chd1)
SLIK complex
109626306 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
109626306
NCBI-ProteinID:
XP_019937666
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDTEKSKEKIEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQHQQQQLQQRQ
SSSNSGSNEDSSSDESDSSSGSKRKRNSGSSDSGSGSGSGSGSGSDSSAEEKSDETASDY
EPSHKMKSRKPPTKMNFRNGKKSSSQKKKNKKCSSSEDEDDNYKKVASAGPRRQATVNIS
YKEDEELKTDSDDVVEVLGEDVPQPEEDEFETLERVMDSRIGRKRAIGSVTTVYAVEADG
DPNTNFNPNKEAGDVQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKDQEKKK
WLKAASPEDIEYFNCQEELIDDLHSQYKIVERIIGHSNQKSAAGYPDYLCKWQGLPYSEC
SWEDGALIARKFQKCIDDYMSRNQSKTIPSRDCKVLKQRPRFVPMKKQPSYIGGDGLELR
DYQLDSLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYMFNEHQLYGPFLLVVPLSTL
TSWQREIQLWAPQMNVVVYLGDISSRNMIRTHEWMHVHSKRLKLNILLTTYEILLKDKSF
LGSVNWAFIGVDEAHRLKNDDSLLYKTMMDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFHSWELFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQ
KQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFLNRAEALQH
LIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIKGEM
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKRQVNIYRLVTKSSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAPFNK
EELSAILKFGAEELFKELEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVA
NFSMMEDEEIDIDSERSQRSWDDIIPEMQRRRMEEEERQKELEEIYLLPRMRNCAKQISF
NAVEGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFNDAEIRRFVKSYKKFG
GPLERLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPDKNSGGRRGKVKGPT
FRISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIEWGKEDDSSL
LIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKE
AQKQAGTANSRKRKPRSKKSKTLKPTKTEEVIKSPSSDPPSDKRSDDEDEVKEEKEMAPV
KPLSRRARADRVVLKEEEDDDDDDDDDDDDDIDDGDDEEPEQEEVSSSGEMEVKEKEIKK
EGKKEKKEESWDIKEIKESKDKKDTKALDSVKQEETVEKNEVKTEARERTKKASDVPVHI
TASGENVPISEESEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIQ
IGDHITECLKEYSNPDLIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQ
NTRSINTHGYKHADIERLKDNSHQDESSRDSYSSERHQATGRYHESSSSKERHGSESHRK
TAGGESRKRPYSFSNGKDHRDRDHYRPDSRDRDRQDRYYNDSKHRKLEEFRSSRDHRLDM
KDYSHSDQRSSYRYHSDWQTEQRASASGPRSPRDQRSPYDGRSPMGHRSPFDYSSDHKST
PEQIWSSRKT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagtgaggatgaaagtgtaagcaacagcagtggagaatcaagtaattct
gatgatgagtctggttctggatcggggtctgcatccgggtcgggctcaggctctagttct
agctcttccagcagtagcagccaatcaggaagcagtgactcaggaagtggctcagactct
ggcagccagtccgactctgacacagagaaatccaaggagaagatagaaccaccaaataag
tcaaacattgatggagctgagttctggaagtccaaccccagtattctagcggtgcagagg
tctgctatgctccgaaaacagcagcttcagcatcagcagcaacagcttcagcaaagacaa
agctcctcaaatagtggatccaatgaggactcatcaagtgatgaatctgattcatcaagt
ggatccaaaaggaaaagaaattcaggttcctctgactccggatcaggttctggatctggg
agtggttctggatcagactcctcagcagaggagaagagtgatgaaacggcatcagactat
gagcccagtcacaaaatgaaaagcagaaaacctccaaccaagatgaattttcggaatggg
aagaaaagcagctctcagaagaagaagaataagaagtgctcttcttctgaggatgaggat
gataactacaagaaggtagcatctgcaggaccacggcggcaggccacagtcaacattagc
tacaaagaggatgaggaacttaagacagactcagacgatgtagtggaagttctgggtgaa
gatgtcccacagcctgaggaagatgagtttgaaacgctggaaagagtgatggacagcagg
atcggaagaaaaagagcaataggaagtgtgaccactgtatacgctgtagaagcagacggg
gaccctaacaccaacttcaatcccaacaaagaggccggtgatgtccagtatttgataaag
tggaagaactgggcccatatccacaatacctgggagacagaagagacactcaagttgcag
aacgtcaagggcatgaagaaactggacaattttaaaaagaaggaccaggaaaaaaagaaa
tggttaaaggcggcttcaccagaggatatagaatacttcaactgtcaggaagaattgatt
gatgacctgcactctcagtacaaaatagtggaaagaatcataggtcattcaaatcagaag
tcagcggctggttatccagactacctgtgcaagtggcagggtttaccatactcggagtgt
agttgggaagacggtgccttgattgccaggaagttccagaaatgcatcgatgattatatg
agccgaaaccagtccaagaccattccatccagagactgcaaggtactcaaacagagaccc
aggtttgtacccatgaagaagcagccatcttacataggaggtgatggactggagctccga
gactaccagctggacagtttaaactggatggcccactcctggtgcaaaggcaacagttgt
atccttgcagatgagatgggcttagggaagaccatccagaccatcagcttcctcaactac
atgttcaatgaacatcaactatatggacctttcctgctcgttgtgcctctctctacactc
acctcctggcagagagaaatccaactctgggcgcctcagatgaatgttgtggtctacctg
ggagacatcagcagcaggaacatgatcaggacacatgagtggatgcatgtccatagcaag
agactgaaattgaatatccttctcaccacatatgagattcttctcaaagataagtcgttt
ttgggcagtgttaactgggcattcattggtgtggatgaggcacacagactgaagaacgac
gattccctcctctataagaccatgatggacttcaagtccaatcacaggcttctgatcaca
ggaacaccgctgcagaactcactgaaagagctctggtccctactgcacttcattatgcct
gaaaagtttcactcttgggagttatttgaggaggagcatggtaaaggcagggattccggc
tacaccagtctgcacaaagaactggagccttttctattgcgcagagtcaagaaggatgtg
gagaaatcccttcctgccaaagtggagcagatcctccgagtggagatgagcgcgattcag
aaacagtattacaaatggatcctgaccaggaactacaaggctcttagtaaaggtaccaaa
ggcagcacatcaggtttcctgaacatcatgatggagctgaagaagtgttgtaaccactgt
tacctgatcaagcctccagaggacaacgagttcctcaacagggccgaagccttgcagcac
cttatccgcagcagtgggaagctggttctgttggacaaacttctggtgcgtttgaaggag
cgaggccacagagttctcattttctcccagatggtacggatgttggatatccttgctgac
tacctgagaagccgacagttcctctttcagagattagatggctccatcaaaggagagatg
aggaagcaggcgttggaccactttaatgcagagggctcagaggacttctgcttcttgtta
tcaacgcgtgcgggtggtctggggataaacctggcatcggctgacacagtagtcatcttt
gactcagactggaaccctcagaatgatctgcaggcccaggcccgagcccacagaatcgga
cagaaaagacaggtgaatatctaccgtctggtgactaaaagctcagtggaggaggacatc
attgagagagcgaagaagaaaatggtgctggaccaccttgtcattcagaggatggacact
acaggcaaaaccgtgctccatactggtgctgctccctcgagttcggcacctttcaataag
gaggagctttctgccatcctgaagtttggtgctgaggagcttttcaaagagctagaggga
gaagagcaggaaccccaggaaatggacattgatgagatcctcaaaagagctgagaccagg
gagaatgaccctggaccctcgacagtgggagaagagcttctgtcacagttcaaggtagcc
aacttctccatgatggaggatgaggaaatagacattgactctgagcgtagtcagcggagt
tgggatgacataattcctgagatgcagaggagaaggatggaggaagaggagagacagaag
gagctggaagaaatctacttgctgccacgtatgaggaattgtgccaaacagataagcttt
aatgctgttgagggccgacagagtaggaacaggagatactctgggtccgacagtgactcc
ccctcagaccgaaagaggccaaagaaaagagggcggcccaggaccatcccacgagaaaat
atcaagggtttcaacgatgctgagatcaggaggtttgttaagagttacaaaaaatttgga
ggaccactggaaaggttggatgccattgctcgtgatgccgaacttgtagataaatctgag
catgacctgaaacgattggcagagactgttcacaatggctgtgtgagaacactgcgtgaa
aatccctgtggaccagacaagaactcaggaggcagaagagggaaagtaaaaggcccaaca
ttcaggatctctggtgtccaggtaaatgccaagcttgttatctcccatgaggaagagctg
gctccactccacaaggccattcctgctgacccagaggagagaaagaagtacatgattcca
tgccactcgaaggcagcgcactttgacattgagtgggggaaggaggatgactccagcctg
ctcataggaatttatgagtatggttatggcagctgggagatgattaagatggacccggac
ctcaatctcacacacaagctcctcccagatgaccctgacaagaagccacaggccaaacaa
ctacagaccagagcagactacctcatcaagttactgagcaaggacctggccaaaaaagaa
gcacagaaacaagcagggacagccaattcacggaagaggaaaccaagaagtaaaaaaagt
aaaactctgaagccgacaaagacagaagaggtgataaagagtccatcctcagatcccccg
tcagacaagagatcagatgatgaggatgaagttaaggaggaaaaggagatggcaccagta
aaaccactgagcagacgggcccgagcagaccgggtggtgctgaaggaggaggaggatgac
gacgatgacgacgacgatgatgatgatgacgacatcgacgacggcgacgatgaggagcct
gagcaggaggaagtttcttcatcaggggagatggaggtcaaagaaaaagagataaaaaaa
gaaggcaaaaaggaaaagaaggaggaaagttgggacattaaagagattaaggagtcaaaa
gataaaaaggacacaaaggcgctggactcagttaaacaagaggagactgttgaaaagaat
gaagtaaaaacggaggccagagaacggacaaagaaagcctctgatgtgccagttcatata
acagcaagtggagagaatgtgccaatttctgaggagtcagaggaactggaccagaggacc
ttcagtgtatgtaaggagaggatgcggccagtgaaagcagccctgaagcagctggacagg
ccggagaaggggctgtcggagcgcgagcagcttgaacatacaagacagtgcctcatacag
atcggggaccacatcactgagtgtctgaaggagtattcaaatcctgatctgatcaaacag
tggagaaaaaacctttggatatttgtttccaaattcactgagtttgacgcaaggaaacta
cataaactgtataagcatgcaatcaaaaaaagacaagaaaatgcccaggcaatggaacag
aacactagaagtataaacacgcatggctataaacatgcagatattgaaaggctgaaggat
aactctcaccaggatgagagcagcagggacagctacagctctgaaagacatcaggctaca
ggtcgataccacgagagcagcagcagcaaggagagacacggctccgagtcccacagaaag
acagcaggaggggagtcaaggaaaagaccgtactccttcagcaacggcaaagaccacaga
gacagagaccactacagaccagacagcagagacagagacagacaggacagatactacaat
gacagtaagcacaggaagctggaggagttccgcagcagcagagaccaccggctggacatg
aaggattattcccactccgaccagcgctcctcctaccgctaccactcagactggcagact
gagcagcgagcctcagccagcgggccccgctctcctcgagaccagcgctcgccctacgat
gggcgctcacccatggggcaccgctcacctttcgactactcgtcagaccacaagagcaca
cccgagcagatctggagcagccgcaagacataa
DBGET
integrated database retrieval system
