Paralichthys olivaceus (Japanese flounder): 109634603
Help
Entry
109634603 CDS
T06037
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109634603 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109634603 (herc4)
Enzymes [BR:
pov01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109634603 (herc4)
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
HECT type E3
109634603 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Hikeshi-like_C
Motif
Other DBs
NCBI-GeneID:
109634603
NCBI-ProteinID:
XP_019950790
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVVEPRVCDFFHGKQVCDVGCGRRHTAFLLQDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQIIVAVSCGESHTLALNDKGQLFSWGLGSDGQLGLNN
LEECVRVPRNIKSLSDVQITQVACGYWHSHALSRGGQVFSWGQSRYGQLGLGLKGQSVST
PQIIQSLQGIPFAQISAGSAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRYCPALLKSLR
SQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGSVVTQIA
CGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVKGPWVASSAPAYTDSEKGF
CVKKIYAGGDQSFAHYCTANILQSKNALRIQDHHGQICTLNEDIIHKWLNHSPGRLPLEI
SNEIDLVFSSASCLNGSFLSVSHPDHFSTSSKYSGVNMNTARILFHRVIQQDHPEIAQQI
AASLEKHLIPRLSNSPPDIEALRLYITLPECPLFIDRNNYVTISIPFAKSLLSLKEAPLK
VLGNWWSGFESRVFQRLVEVYKEVVVYLLQMHKVGIPSVEQRIFTCFLDTSLRLLEILHV
VSERAGHIIQYDKFYIHELDDLIDIRNDYVTWIQRQMYPMGHDGVVTLCRYPFVFDAQAK
TTLLQTDAVIQMQIAVDQAQMQNFSSMFLPAVESVNPCLILIVRRENIVGDTMEVLGKSK
NVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMKELLDPKYGMFRYYEESRLIWFSNKTFE
DIDLFNLIGVICGLAIYNLTIVELNFPVALYKKLLKKKPALDDLKELMPDVGRSLQHLLD
YTEDDLEETFCLNFTITEDNYGATEVLELVPNGEDINVNKSNRQDFVNAYVDYVFNTSVA
PLFECFYAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWTELEKTTEYKGEYWADHPTIR
LFWEVFHSLTLEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGENYLPVAHTCFNLLD
LPKYTSLETLKKKLLQAIDHNQGFNLA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctgggggaatgcctcctacggacagctgggcttgggtgggatcgacgaggag
atcgtggtggagccgcgggtgtgcgacttcttccacgggaagcaagtgtgtgacgtgggg
tgtggccgcagacacacagccttcctgctgcaggacgggacagtgtatacctgtggctgc
aatgacctgggtcagctgggacacgagaagtccaggaagaaaccagaacaggttgtggcc
ctggatgctcagatcatagtggcggtgtcgtgtggagagtctcatactctcgccctgaat
gataaagggcagctcttttcatggggtttgggctcagatggccagctgggcttgaataac
ttggaagaatgtgttcgtgtgcctcgaaacatcaagagtttgtcagatgtacaaatcact
caggtagcctgtggatattggcactctcatgcactttcaagaggaggtcaagtcttctcg
tggggccagagtcgatatggacaacttgggctaggattaaagggacagagcgtttccacg
ccacaaatcattcagtctctgcagggcattccttttgctcaaatatctgcaggtagtgcc
cacagctttgccctcacgctctcaggagcagtgtttggttgggggcgcaacaagtttggt
cagctgggtctcaatgacaccaatgatcgatattgcccagctctgctgaagtctcttagg
tctcagagagtgatttacatctcctgtggagaagatcacacagcagcactgaccaaggag
ggaggtgtgtttacatttggagcgggtggatacggacaacttggacataactccacaaac
catgaaatcaaccctaggaaagtgtttgagctcatggggagtgtagttacgcagatcgca
tgtggaaggcagcacacgttggctttcacaccctcctctgggaagatggactcatttggg
cttggtggtaacgggcagcttggtacacgctccacatgcaacaggaaaagcccggcccct
gtcaaaggcccctgggtagcctccagtgctccagcttatacagactcagagaagggcttt
tgtgtcaagaagatttatgctggaggagatcagagttttgctcactactgcactgccaat
atcttgcagagcaaaaacgctttgaggatacaagatcaccacggacagatttgcaccttg
aatgaagatatcatacacaaatggttgaaccattcaccaggacgactcccgctggaaatc
tccaatgagattgacctcgtgttctcctcagcaagctgcctcaatggatcttttctgtca
gtgagtcatccagatcacttcagtaccagcagcaaatattcaggcgtgaatatgaacaca
gctcgcatcctgtttcacagagtgatccaacaagatcaccctgagatagctcagcagatt
gctgctagtctagaaaagcacttaattcccagactgagcaactctcctccggatatcgaa
gccctgagactctacatcactcttccagaatgccctctcttcattgaccgaaacaattat
gtgaccatttccatcccatttgccaaatcgctcctcagcctgaaggaggctccacttaag
gtgctaggaaactggtggtccgggtttgagtccagagtcttccagcggctggtcgaggtg
tacaaggaggtggtggtgtatctccttcagatgcacaaggtgggcattccttcagtcgag
cagagaatctttacctgtttcctggacacgtccctccgactcctggagatcctgcatgtg
gtgagtgaacgggccggacacatcattcagtacgacaaattctacatccatgagctggac
gacctgatagacatcagaaacgactacgtcacatggattcagaggcagatgtacccaatg
ggccatgatggtgtggtgactctgtgcaggtatccctttgtgtttgatgcccaagccaag
accactctgcttcagactgatgctgtcatacagatgcagatagctgtggaccaggcacag
atgcaaaatttcagctctatgttcctgccagcagtggaatctgtcaacccgtgcctcatc
ctcatcgtccggagggaaaatatagtcggagacaccatggaagtcctcgggaagtccaag
aatgttgactacaagaaaccgctcaaggtgatctttgtaggagaagaggcggtggatgca
ggaggcgtgagaaaggagttcttcctcttgatcatgaaagagctgctggatcccaaatat
ggcatgtttcgttactacgaggagtccaggctcatctggttttcaaataagacctttgaa
gacattgacctgttcaacctcatcggggtcatctgcggtctggccatctacaatctcacg
atagtggagctcaacttccccgtggccctttacaagaagcttctgaagaagaagccggca
cttgacgacctgaaagagctaatgccagatgtgggaaggagtctacaacacttactggac
tacacagaagatgacctcgaggaaacgttctgtttgaacttcacaatcactgaggacaac
tatggtgccacagaggtgttggaactcgtaccgaatggcgaagacatcaatgtaaataaa
tcaaacaggcaggactttgtcaacgcctatgttgactacgttttcaacacatccgtggcc
cctctgtttgagtgcttctatgcaggctttcacaaagtgtgcggtggaaaagtcttggag
ctgttccagccaaacgaactacaagccatggtcattggcaacaccaactatgactggaca
gagctggaaaagactactgaatacaaaggggagtactgggcagaccatcccaccatcaga
ctcttctgggaggtgttccacagtctgactttagagaagaaaaaacagttcctcttgttc
ctcacaggaagtgaccgtatacccatcttgggcatgaaaagcctgaagcttgtgatccag
cccaccggtggaggggagaactatttacctgtggcccacacctgcttcaacctgctggac
ctgcccaagtacacgagtctagaaacactcaaaaagaagctcctgcaggctatagaccac
aaccaaggctttaatcttgcctaa
DBGET
integrated database retrieval system
