Paralichthys olivaceus (Japanese flounder): 109636760
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Entry
109636760 CDS
T06037
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pov01002
]
109636760 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109636760 (usp47)
Enzymes [BR:
pov01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109636760 (usp47)
Peptidases and inhibitors [BR:
pov01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109636760 (usp47)
Ubiquitin system [BR:
pov04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109636760 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
USP47_C
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
109636760
NCBI-ProteinID:
XP_019954248
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MEMVPSEENQFVSKEGVFWSCRQSIFDEMKKKISQIQNAAEEPRVLCIIQDTTCAKTVNE
RLTLNLPASTALSTFYKDVAQKAGYVNGTFDLVWGNTLDMKPLDHNSEMSLSESGFEPGG
KRNFLQLTDKEGEQPKIASDESGAADSSGLDDSSQERFIGPLPRDATAGCSGDYSSPSYS
YSSILNKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQ
LQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDIQELCRVMFDALEQKWKQTEQAD
LINQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGVSQAYGSVEEALQAFIQPET
LDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEEL
DMSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTGSTERV
LKPKSLLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTHGG
SSGNRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLSVEDFPEHITSLVQKEKESEEQEKR
QREIERNTCKIKLFCMHPVKLMMESKLEVHKDKTLREATEMAYKLMELEGVVALDCCRLV
KYDEFHEYLERSYEGEEDTLMGLLLGGVKSSYMFDLLLETRRPEQVFQPYKPGEVMVKVH
VVDLKSETIASSISVRAYLNQTITEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNK
TLKAEGFFRSNKVFIESSESTDHQVAFTDSVLWKLLDRHGNTIRLLVLLPEQSPGTLANR
TLCQKVGDDSDVPFDGSNGNRKSVEAILEESTEKLKNLSLQQQQQQQQQQQQGSSNSDSQ
KSSDASDFEHIESPTQEADSNSSLCVAADNRELENRIRATAGCSGGASSDPCEERSDSEV
NNDRSTSSVDSDILSSSHSSDTLCNADSGPLQLANGLDSHSITSSRRSKAHEGKKETWDT
AEEDSGTDSEYDDNGKSKAEAHYLYFRAEPCSQDDSSWDSQKCLVVHVDKRITLAAFKQN
LEPYVGVTSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKEGFICWDSTEEPMELSEDE
RNELMKKESSRLLKTGHRVSYSPRKEKALKIYIDGGPAKDPGQD
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtgcccagcgaggagaaccagttcgtatccaaagagggtgttttttggagt
tgcagacaaagtatttttgatgagatgaagaaaaagatttctcagatccaaaatgcagct
gaggagcccagagtgttgtgtatcatccaggacacaacctgtgcaaagacagtcaatgag
aggctgaccctaaacctgccggcttccaccgccctctccactttttataaagatgttgcc
caaaaagccggatatgtcaatggcacatttgatcttgtttggggaaatacattggacatg
aaacctctagaccacaacagtgagatgtccctctcagaatctgggtttgagcctggtggt
aagaggaattttctccagcttacagacaaagaaggagagcagcccaagattgcatcggat
gagtcaggagcagcagacagcagtggactggatgatagctcacaggagcggtttattggg
cccctaccaagagacgccactgcaggctgcagtggtgactacagcagtccatcttactcc
tactcatccatcctcaacaaatctgagacgggttacgtgggcttggttaaccaagcaatg
acctgctatttgaacagtcttctacaaacactgttcatgaccccagagttcagaaatgca
ctctacaactgggagtttgaggagtcggaggaggatccagtcacaagtatcccctaccag
ctgcaaagactatttgtcctgctgcagacaagtaagaaacgggcgattgagaccactgat
gtgacccggagctttggttgggacagcagcgaggcttggcagcagcatgacatccaggag
ctgtgcagggtcatgtttgatgccctggaacaaaagtggaagcagacagagcaggctgac
ctgatcaaccagctctaccaggggaagctgaaggattatgtccgttgtctggagtgtggc
tatgagagctggaggattgacacttacctggacatccctcttgtgatcagacccttcgga
gtcagccaggcctatggcagtgtggaggaggctttgcaggcattcatccaaccagaaacc
ctggatgggcccaaccagtacttctgtgaacgttgcaaaaagaaatgcgacgcccgaaag
ggtctaagatttctgcacttcccctacctgctgacgctgcagctgaaacggtttgatttc
gactacaccactatgcatcgcatcaagctgaatgaccgcatgactttcccagaggaactt
gacatgagcccattcattgatgtggaagacgagaagtcgcctcagactgagagctgcact
gacagtggagcggagaatgaaggcagttgccacagcgaccagatgagcaatgatttttcc
actgatgactgtgtggatgagggcatctgcttggacagcaccggcagcacagagagggtg
ctgaagccaaagagtttgctgacctttgagctgttctccgtcatggtccattctggaagt
gctgctggtggccattactatgcctgcatcaaatccttcagcgatggccagtggtacagt
ttcaacgatcagcacgttagcaagatcacccaggatgatataagaaagacacatgggggg
tcgtcagggaacagaggctattattctagtgcctttgcaagctctacaaatgcatatatg
ctgatctatagactgaaagatccctcaaggaatgcaaagtatttatctgtggaagacttc
ccagagcacataacgagtttggttcagaaggagaaagagtctgaagagcaggaaaagaga
cagagggagatagagcgcaatacctgcaagatcaagctgttctgtatgcatcctgttaag
ctgatgatggagagcaagctggaagttcacaaggacaaaacactcagagaagcaacagag
atggcctacaagctgatggagctggagggggtcgtcgctcttgactgttgtcgcttggtc
aagtatgacgagttccacgagtacctggagcgctcttatgagggggaggaggacacactg
atgggtctcctgttgggaggagtcaagtcctcgtacatgttcgacttgctgctggagacc
cgccggcctgagcaagtgttccagccttacaaacctggagaggtgatggtgaaggttcat
gttgtggatctgaagagtgagaccattgcctcctcaatcagcgttcgggcttacttgaac
cagacaatcactgaattcaaacagcttattgcacaggctacagggctatcagcagaaacc
atgcgtgtggtccttgagcgctgctacaacgacctccgtctcctctatgttccaaacaag
accttgaaagctgagggattcttcaggagtaacaaggttttcatagagagctcggagtcg
acggatcatcaggttgctttcactgactcagtcttgtggaaactgttggatcgtcacggg
aacacgatccgactcctggtcttactgcctgagcagtcgcctggcaccttggccaacaga
actctttgccaaaaagtgggagatgactctgatgtgcccttcgatgggtccaatggtaac
aggaagtctgtcgaggctatactagaggagagcacagaaaagttaaagaatctgtctctg
cagcagcagcagcagcagcagcagcagcagcagcagggctccagcaacagtgacagccag
aaaagctctgatgccagcgactttgaacatatcgagtctccgacccaagaggctgactca
aactcctcactgtgcgtcgctgcagacaacagagagttggagaaccggattagggccaca
gctggctgcagcggtggtgcctcctctgacccctgtgaggagcgctcagactctgaggtg
aacaatgaccgcagcaccagctcagtggacagcgacattctcagctccagccacagcagt
gacactctgtgtaatgcagacagcgggcccttacaattggccaatggcctggactcgcac
agcatcacgagtagccggcgctccaaagctcatgagggcaaaaaagagacgtgggacact
gctgaagaagactctgggaccgatagcgagtatgacgacaacgggaagagcaaggcggag
gctcattacctttacttcagagcagaaccttgttctcaggatgactcctcgtgggattca
caaaaatgtttagtagttcacgtggacaagagaataacattagcagcgtttaaacagaat
ctggagccctacgtcggagtgacgtcgacgcagttcaaggtgttccgggtgtacgccaac
aaccaggagtttgagagtgtccggctaaacgaaacgctgtcatccttctctgatgataat
aaggagggattcatttgttgggatagcactgaggagcctatggagctgtcggaggatgag
cgcaacgagctgatgaagaaggagagcagccgtctgctgaagaccggtcaccgtgtcagc
tactcgccacgcaaggagaaagccctcaagatctacatagatggaggccctgccaaagac
ccggggcaggactga
DBGET
integrated database retrieval system
