Paralichthys olivaceus (Japanese flounder): 109641172
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Entry
109641172 CDS
T06037
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109641172
03036 Chromosome and associated proteins [BR:
pov03036
]
109641172
Transcription factors [BR:
pov03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109641172
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109641172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-met
zf-C2HE
zf-C2H2_6
DTHCT
DDE_5
Motif
Other DBs
NCBI-GeneID:
109641172
NCBI-ProteinID:
XP_019961089
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MNQPSMDAGPSESVGVVEVHNQDAMVADLLQQAAEAGGVVEGQAGVILEQGHGEGMVAAT
QAQQQLMEAGVSVDGGEGVEMMVMDSLDPTLLQMKTEVIDAAVGGSSAGSAHQATVTTVD
QTQIITLQVVNMEEQAALGLGELQLVQVPVSATTVEALQQGTFVDTTAMPKDGDPVICHT
LPLPEGFQVVKVGANGEVETVEQEEEGGQAHPEEEDEEVGNQLLEEGEDGPIQTPNDPNW
AKDPDYQPPSGMVKKTKKGKKSRLRYAEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGN
MKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTL
LRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQ
KHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHERYALIQHQKS
HKNEKRFKCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFKRYHDP
NFVPTAFVCPKCSKTFTRRNTMARHSENCSGEVEDAENGTPTPKKGRRGRKRKMRSRRDD
DDDSEEDHVDPDEEEEGEGEEESSLLQDDEDPESMELDQAPAAIPVPAPDEPPVKRKRGR
PPKNAPKPPTPIKSVRVAAKTTAAAAIIQVEDESTGAVENIIVKKEEGDMSTATPLEEGV
ALTVEGVGLDGEGVETVELAVNEETAAAAANGDLTPEMILSMMDR
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaacccagcatggatgcagggccatcagagagtgtaggggtggtggaggtccac
aaccaggacgccatggttgctgacctcctccagcaagctgcagaagccgggggcgtggta
gagggacaagctggagtcatccttgaacaaggtcatggggaaggaatggttgcagccacc
caggcccagcaacagctaatggaggccggggttagtgtagacggtggagaaggtgttgaa
atgatggttatggactcactggatcccaccctgttgcagatgaagaccgaggtgatagat
gctgcagtgggggggtcatcagctggttcagctcaccaagcaactgttacaacagtggac
cagactcaaatcatcacgctacaggtggttaacatggaggagcaggcagctttgggcctc
ggagagctgcagctggtccaagtgccagtttctgccaccactgtggaggccctgcagcaa
ggcacctttgttgacaccactgcaatgccaaaggatggagacccagtcatctgccacacc
ctgccgcttcctgaaggcttccaggtagttaaggttggtgctaatggggaggtggagaca
gtggagcaggaagaggagggaggacaagcccaccctgaggaggaagatgaggaggtgggg
aaccagctgttggaagaaggggaagatgggcctattcagactccaaatgacccaaactgg
gctaaagatccagactatcagcctccatctggaatggtgaaaaagaccaaaaagggaaaa
aagagtcgtctgcgttatgctgaaggagataaggatatggatgtcagtgtctatgacttt
gaagaagagcagcaagagggccttctgtctgaggtcaacgctgagaaagtggtgggcaac
atgaaaccacccaaacctacaaagattaaaaagaaaggagtgaagaagacatttcagtgt
gaactgtgcagctacacctgccctcggcgctccaacttggacagacacatgaagagccac
accgatgagaggccccataaatgtcacttgtgtggaagagcctttaggacggtcaccttg
ctaagaaaccatctcaacacacacaccggaactcggccacacaagtgcacagactgtgat
atggcttttgtgactagcggagagctggttcgtcatcgtcgctacaaacacacacatgag
aaacccttcaaatgctccatgtgtgactatgccagtgtggaggtgagcaaactaaagcgt
cacattcgatcccacaccggcgagcgtccattccagtgcagtctctgcagctacgccagt
agagacacgtacaagctgaagagacacatgaggacacactcaggagagaaaccttatgag
tgctacatctgccacgcccgttttacccagagtggaaccatgaaaatgcacattctgcag
aaacacactgagaacgtggccaaattccactgtccacactgtgacacagtgatcgcacgg
aagagtgacttgggtgtccatcttcggaagcagcactcgtttattgagactggaaagaag
tgtcgttactgtgacgcagttttccacgagcgctacgctctgatccagcaccagaagtcc
cataagaacgagaaaaggttcaaatgcgacatgtgtgactactgctgtcgccaggagcga
cacatggtgatgcatcgtagaacccacactggagagaaaccatatgcctgcagccagtgt
gaaaagaccttcagacagaagcagctgctggacatgcacttcaaacgctaccacgacccc
aactttgtccccaccgcttttgtctgccccaagtgtagcaagaccttcactcgcaggaac
actatggcacgccattcggagaactgcagcggtgaggtggaggatgctgagaatggaact
cctaccccaaagaaagggagaagaggaagaaaaagaaagatgaggagcaggagagatgat
gatgacgacagcgaggaggatcatgttgatcccgatgaggaggaagagggtgagggagag
gaagaatcgtcactgctacaggacgatgaggacccagaaagcatggaattggaccaggcc
cctgccgccatccctgtcccagcccccgacgagccaccagtcaagaggaaacgaggcaga
cccccgaagaatgcccctaagcctccaacacctatcaagtcagtcagagtggctgccaag
acaacggctgctgctgccatcattcaggtggaggatgagagcactggagcggtggagaac
ataatagtgaagaaggaggagggtgacatgtccacagcgacacctctagaggagggagtg
gccctgaccgtggagggggtggggctggatggggaaggggtagagactgttgagctggct
gtgaacgaagaaacggcagctgctgccgcaaacggcgatctgacgccagagatgatcctg
agcatgatggaccggtga
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