Paralichthys olivaceus (Japanese flounder): 109642047
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Entry
109642047 CDS
T06037
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03022
Basal transcription factors
pov03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109642047 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
109642047 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109642047 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
pov03400
]
109642047 (gtf2h4)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109642047 (gtf2h4)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109642047 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
109642047
NCBI-ProteinID:
XP_019962244
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MKLRVQLQCKNLHEYLRELSPDILDRLYNHPATCLAVYRELPSMAKNYVIRMLFLDQPLP
QAAVALWVNKDNQKDHDECVSVLVGLCLWHCQQLQGGLQGYILNPVFKDNLMIALLGGGK
AWADEGSTLGPDRHARDIESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLVQACLMKS
EAGEAPYITSAGFQFLLLDTSSQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTSTSSCSNFTSTP
GTGDAGFIVVETNYRIYAYTNSELQIALVALFSEMLYHFPNVVVAQVTRESVQQAIANGI
TAQQIIHFLRTRAHPVMLKQSPVLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQADFE
VLRDRAQGLGCLVWQDVAHRVMVVTPQGHSEVKRFWKRQKSHS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacgtgtccaacttcagtgtaagaatttgcatgagtacttgagagagctgagt
ccggacatcttggacagactgtacaaccatccagcaacttgtctggcggtctacagggaa
ctcccctctatggccaagaattatgtgatacgtatgctgttcctggatcagccacttcca
caggcagcagtcgcattgtgggtgaataaagacaatcagaaggatcatgatgaatgtgtc
tcagtgttggtaggactgtgcctttggcactgtcagcagctccagggtggtctgcaggga
tacattttaaatccagtgttcaaggacaaccttatgattgcgctgcttggcgggggcaaa
gcatgggcggatgagggcagcactttgggtcctgaccgccatgcacgggacattgagagt
cttgaccgttacgctatggagcgttgggaggtcattctgcatttcatggtgggctctccc
agtgctgctgtcagtcaggacttggcacagctgctagttcaagcatgtctcatgaaaagt
gaggcaggagaggcgccctatattacctcagctggtttccagttcctcctcctggacacc
tcctctcagctgtggtacttcaccctgcagtacctcaaaactgctcagtctagagggatg
gacctggtggagatcttgtcattcttattccagctcagtttctctactctgggcagagat
tactcagtggagggcatgagtgagtcgttactcactttcctgcagcatctgcgggagttt
ggactggtcttccagaggaagagaaagtcaagacggtattaccccaccagactggccatc
actctggctgcaggggtcactaccagcacctcctcctgctctaacttcacttccactcct
ggtactggagatgcaggcttcattgtggtggaaacaaattatcgtatctatgcttacaca
aactccgaacttcagatcgctttggtggctctctttagtgaaatgctttatcacttccct
aatgtcgttgtggctcaagttacaagggagtcagtacaacaggccatcgccaatggtatc
actgcacagcagatcatccactttctaaggaccagagctcaccctgtcatgcttaaacag
tctccagtgttgcctccaaccataacagatcagatccgactatgggagctggagagagat
cgactacagttcacagagggagttctgtataaccagttcctctcccaggctgactttgag
gtgctgcgagacagagctcagggtctgggctgtctggtgtggcaggacgtggctcacagg
gtgatggtggtgactccgcaaggacacagtgaggtcaagaggttctggaaacgacagaag
tcccactcataa
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