Paenibacillus sp. 32O-W: IJ21_25460
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Entry
IJ21_25460 CDS
T04219
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pow
Paenibacillus sp. 32O-W
Pathway
pow03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IJ21_25460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pow03400
]
IJ21_25460
Enzymes [BR:
pow01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IJ21_25460
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IJ21_25460
DNA repair and recombination proteins [BR:
pow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IJ21_25460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALS27942
UniProt:
A0A0U2W4B8
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All DBs
Position
2807943..2808761
Genome browser
AA seq
272 aa
AA seq
DB search
MPELPEMETYRKLLGEKVAGKRIAGAEVTREKSINVPAHLFDRELTGRTIWYIERRGKHL
LFHLDSGKRLLLHLMLGGWMHYGTEADRPDRTVQVTLRFADGSELYFIGLRLGYLHLLTA
KEADERLANLGPDPFDKRLAEERFRERFKGRRGTLKAALVDQTVLSGIGNCYADEIAFAA
SVRPDARIPELAPDSWNRLYAAMRSVLREAVEAGGYMEQPLFAGDSLTGGFNDRCKVYDR
PGEPCFRCGGTIVQEQLSSRKVFYCPSCQKDR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaaatggaaacttaccgaaagctgctaggagaaaaagtcgccgga
aagcggattgccggtgcggaagtcacgagagaaaagtccatcaacgttccggcccacctg
ttcgatcgggaactgaccggacggacgatctggtatatcgaacgaaggggcaaacatttg
ctgtttcatcttgacagcggcaaaaggcttttgctccatttgatgctcggcggatggatg
cattacggtacggaagcggaccgtccggatcggacggttcaggtcacgctccgtttcgcg
gacggcagtgagctgtatttcatcggcttgcggctcggttatttgcatttgctgacggcc
aaagaagcggatgagcggctggcgaatctcggacccgatccgttcgacaagcggcttgcc
gaggagcggttccgcgaacggttcaaaggcagacgcggaacgctcaaggcggcgctggtc
gatcaaaccgtactgtcgggaatcggcaactgctatgccgatgaaattgcctttgccgct
tccgtaagacccgacgcgcgcatcccggagcttgcgcccgactcctggaaccggctgtac
gccgcgatgcgcagcgtgctgcgcgaggcggtggaagccggcggctatatggagcagccg
ttgtttgccggcgacagtctgacgggcggattcaacgaccgctgcaaggtttacgaccgc
cccggcgagccttgcttccgctgcggcggaacgatcgtgcaggagcaattgtcgtcgcga
aaagtattttactgcccgtcctgccagaaggacaggtaa
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