Pandoraea oxalativorans: MB84_01625
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Entry
MB84_01625 CDS
T03840
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pox
Pandoraea oxalativorans
Pathway
pox00300
Lysine biosynthesis
pox00550
Peptidoglycan biosynthesis
pox01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MB84_01625
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MB84_01625
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pox01011
]
MB84_01625
Enzymes [BR:
pox01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
MB84_01625
Peptidoglycan biosynthesis and degradation proteins [BR:
pox01011
]
Precursor biosynthesis
Amino acid ligase
MB84_01625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF2694
Methyltransf_18
Motif
Other DBs
NCBI-ProteinID:
AKC72050
UniProt:
A0A0E3YGE4
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Position
complement(4954607..4956145)
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AA seq
512 aa
AA seq
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MVADATDRAALAQAWDWLRRTVAAGATLHADSRRVTAGDVFVAYAVKGADSRGFIADAVE
RGAAAVLWQSDDFTWPASLTSLANVPQFGVARLDWLAGPLAALWYGEPSVGMTMFGVTGT
NGKTSCSQWLAQLLSKTNVRSAVIGTLGSGFPGHLTVTGFTTPDAVQLQHSLDDLRAQGA
AAVAMEVSSHGLYQGRVNGVAFDVAVFTNLTQDHLDYHGTMAEYEAAKTRLFDWPGLKAA
VVNRDDAMGQRLLTRLAGKTPVFEYGIHGAATSAHGNRVLRAEDIRATTAGTRFTLHIDD
HSQQVTVPLIGEFNISNALAVLGAALGAGVAQDAAIAGLATLAPVSGRMEQIGQPGQPLV
VIDYAHTPDALDKTLAALRPVTQARGGKLVCVFGCGGDRDAGKRPQMGAVAERLADAIVL
TSDNPRTEVPAEIMAQIAAGLAQPDAARRIEDRASAILQAVRGAQAADVVLIAGKGHEST
QEIMGKKRPFSDQEHARLALAARATTVRGGGE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcggacgccaccgatcgcgccgcgctcgcgcaggcgtgggactggctgcgccgc
acggtggcggcgggtgccacgttgcatgcggatagccgtcgtgtgacggcgggtgacgta
ttcgtcgcttacgcggtgaagggtgccgacagccgtggctttattgccgacgccgtcgag
cgcggcgccgctgcggtgctctggcagagcgacgatttcacctggcccgcatcgctcacg
tctctcgccaatgtgccgcagtttggcgtggcgcgcctcgactggctcgcgggcccgctc
gcggcgctctggtacggcgagcctagcgtcggcatgacgatgttcggcgtgacggggacc
aacggcaagacgtcgtgcagccaatggctggcgcaattgctctcgaagacgaacgtgcgc
agtgccgtgatcggtacgctgggcagcggctttcccggccatctcacggtgacgggcttc
accacgcccgacgccgtccagttgcaacacagcctcgacgatctgcgcgcgcaaggcgct
gcagcggtcgcgatggaggtgtcgtcgcacggtttgtatcagggacgcgtgaatggcgtg
gcgttcgacgtggcggtgttcaccaacctgacgcaggaccatctcgactatcacggcacg
atggccgagtacgaagcggccaagacgcgcctgttcgactggccggggctgaaggcggcg
gtcgtcaatcgcgacgatgcgatgggacagcgtttgctgacacgtctggctggcaagaca
ccggtcttcgaatacggcattcacggtgccgcgacgtcggcgcacggcaaccgcgtgctg
cgtgcggaagacatccgtgcaacgactgcgggcacgcgcttcacgctgcacatcgacgat
cacagccagcaagtgacggtgccgctgatcggtgagttcaacatcagcaacgcccttgcc
gtgctaggtgccgcactgggcgctggtgtcgcgcaagatgccgccatcgccggactcgcg
acgctcgcgccggtgtccggccgcatggagcagatcggacagccggggcagccgttggtg
gtgatcgattacgcccatacgcccgacgcactcgacaaaacgctggctgccctgcggccc
gtcacgcaagcacgcggcggcaagctcgtctgcgtgttcggttgcggcggcgatcgcgat
gcgggcaaacgtccgcagatgggggcggtggccgagcgtctggcggatgccatcgtgctc
acgagcgacaacccgcgcaccgaagtgcccgccgagatcatggcgcagatcgctgccggt
ctcgcgcagccggacgctgcacgtcgcatcgaagaccgcgcaagcgcaattcttcaggcg
gtgcgcggcgcgcaggccgcagacgtcgtgctgatcgcgggcaaaggacacgaaagtaca
caggaaatcatgggcaagaagcggccgttctccgatcaggaacacgcgcgtctggcactt
gctgcgcgtgcgaccacggtgcgcggaggtggcgaatga
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